Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01374 ATGCTTCAGGCATTCATGAATCTGCTCTCTCTCTGTTGGAAGCCATTCGGGCGTGGTGCTGAGGGATTAGACAATAACGGACCTGTTGGGAGCACTTTAGGGGGTGGGGCAGGCTACAAAGAAGGCAAAGACGGCTTGCTTTGGTTCCGAGATGTTGGAAAGTATGGTTCCGGCGATTTCTCGATGGCTGTGGTTCAGGCGAATCAGGTCCTTGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGAACCTTTGTAGGTGTATACGATGGTCACGGAGGACCCGATGCATCTCGATATGTTTGCGATCACTTGTTTCGTAACTTTCAAGCAATAACCGAACAGTCACAGGGAGCTGTGACTGCTGACACTATTCATAGAGCATTTCTTCAAACAGAAGAGGGGTTCACTTCTCTTGTATCAGAATTATGGAATACACGACCTCAGATTGCAACTACTGGGACTTGTTGTCTAGTTGGAGTGATATTTCAGCAGACCCTCTTTGTGGCTAATGTTGGAGATTCCCGCGTTGTGTTGGGTAAGAAAGTTGGTAATACTGGAGGTATGGCTGCCATTCAGCTATCTACCGAACATAATGCAAATCTTGATGCAATCAGACAGGAACTTAAAGAATTACATCCCCATGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGGTTTCTAAGTCTATAGGTGACGTATATATGAAACATGCGCAGTTCAACCGGGAACCAATTAATCCAAAATTCAGACTTCCAGAGCCAATGAACATGCCTATCTTGTCTGCTAGTCCAACAATTCTTTCTCATTCTCTCCAGCCCAGTGACTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTAAGTAATGAAAAAGCAGTGGATATTGTCCACAGCAATCCACGGCCGGGTAGTGCCAAGAGACTTATCAAGGCTGCCCTCCAAGAAGCAGCAAAGAAAAGAGAGATGCGGTACTCGGACCTCCGCAAAATTGACAAGAAGGTTCGACGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAGAGGCACAGTGATAGACCCTCCTCTTTCAATTCGAAGTGCTCTTGATCACTGA 1152 0.4531 MLQAFMNLLSLCWKPFGRGAEGLDNNGPVGSTLGGGAGYKEGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDHLFRNFQAITEQSQGAVTADTIHRAFLQTEEGFTSLVSELWNTRPQIATTGTCCLVGVIFQQTLFVANVGDSRVVLGKKVGNTGGMAAIQLSTEHNANLDAIRQELKELHPHDPQIVVLKHGVWRVKGIIQVSKSIGDVYMKHAQFNREPINPKFRLPEPMNMPILSASPTILSHSLQPSDSFLIFASDGLWEHLSNEKAVDIVHSNPRPGSAKRLIKAALQEAAKKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVIDPPLSIRSALDH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01374 383 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Accr12g01374 383 ProSiteProfiles PPM-type phosphatase domain profile. 59 360 IPR001932 -
Accr12g01374 383 SMART PP2C_4 46 358 IPR001932 -
Accr12g01374 383 Gene3D - 51 368 IPR036457 -
Accr12g01374 383 FunFam Probable protein phosphatase 2C 42 50 368 - -
Accr12g01374 383 SUPERFAMILY PP2C-like 69 361 IPR036457 -
Accr12g01374 383 CDD PP2Cc 60 360 IPR001932 -
Accr12g01374 383 PANTHER PROTEIN PHOSPHATASE 57 358 IPR015655 GO:0004722|GO:0006470
Accr12g01374 383 Pfam Protein phosphatase 2C 83 330 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01374 Accr-Chr12 18213440 18216891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01374 1 380 PP2C-type Phosphatase Gene Family AT4G38520 57.069 4.62e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01374 K01102 - qsa:O6P43_003685 666.766