Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01373 ATGGCGGTAGAGGTGCTGGTAGGTGCTGCTATAAAGGTTGCGTTTAAGCTAATTGTGGTTGCAGTTAAGAAAGCGAGGAAAGAGAAGGAACTTATTAAAGACTTTGAACCCCAATTGAAGCAACTGGAAGAGACACTGCAAATGGTAAAACCTATGCTCGCAGATATAGAGAAAACTAGCACAAAGCTGAAAGAATCGGATCAGAGAGAAGTAGAACTCCTAAAATCAATTCTGGAAGAAGGCAGTAAGTTAGTTTCCGATTGTCTTAGCGAATCACCGTTGAAAAATGTCAAGAAGTTACGCTACCAGAAGCAGCTGGTGGAGCTTGAAAACAAAATCATAAGGTTCCTTATTACACATATTCAATTGGGCACATTTCGGGAGGTCAAGAATGTACGTTTGGAACTACGTGCTGGATTCAGTGAACTCTCTCGTCAGATTGAAAGTATTAAGCAAGATGAACTCTCTTCATTCGGGTGTGGTGCTGTGAGATTCGACAATATCGCAGCTGTTGCGAGCATTTTCTGGGGTGGGGTACGCTACAAAGAAGGCAATGACGGCTTGCTCTCGTTCCCAGATGTTGGAAAGTATGGTTCCGGCGATTTCTCGATGGCTGTGGTTCAGGCGCGTCAGGAGCTTGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGAACCTTTGTAGGTGTATACGATGGTCACGGAGGACCCGAGGCATCTCGATCTGTTTGTTATCACCTGTTTCGTAACTTTCAAGCAATAGCCGAACAGTCACAGGGAGCTGTGACTGCTGACACCATTCATAGAGCATTTCTTCAAACAGAAGAGGGATTCACTTCTCTTGTATCAGAATTATGGAATGAACGACCTCGGATTGCAACTACTGGGACTTCTTGTCTAGTTGGAGTGATATTTCAGCAGACCCTCTTTGTGGCTAATGTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAATTCGGCGACACTGGAGGTATTGCTGCAATTCAGCTATCTACCGAACATAATGCAAATCTTGATGCAATCAGACAGGAACTTAAAAAATCACATCCTCATGATCCCCAAATTGTTGTCCTCAAAGATGGAGTGTGGAAAGTCAAAGGCATTATTCAGGTTTCTAGGTCTATAGGTGACGTATATATGAAACATGCGCAATTCAACCGGAAACCAATTAATCGAAAATTCAGACTTCCAGAGCCAATGAACATGCCTATCTTGTCTGCTAGTCCAGATATTATTTCTCATCCTCTCCAATCCAGTGACTCCTTCCTTATATTTGCATCGGCTGGTTTATGGGAGCACTTGAATAATGAAGAAGCAGTAAATATTGTCCAGAGCAATCCACGGCCGAAGGGTAGTGCCAAGAGACTTATCAAGGCTGCCCTCGAAAAAGCAGCAAAGAACGAAGATAAGCAGTATTCGGAACTCCGCGAAATTAAGAAGGGGGGTCGACTCAAATTTCATGGCGATATGACTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAGCGGCACAGTGACAGACCCTCCTCTTTCAATTCGAAGTGCTCTTGGATCTTGA 1581 0.4383 MAVEVLVGAAIKVAFKLIVVAVKKARKEKELIKDFEPQLKQLEETLQMVKPMLADIEKTSTKLKESDQREVELLKSILEEGSKLVSDCLSESPLKNVKKLRYQKQLVELENKIIRFLITHIQLGTFREVKNVRLELRAGFSELSRQIESIKQDELSSFGCGAVRFDNIAAVASIFWGGVRYKEGNDGLLSFPDVGKYGSGDFSMAVVQARQELEDQSQIESGPLGTFVGVYDGHGGPEASRSVCYHLFRNFQAIAEQSQGAVTADTIHRAFLQTEEGFTSLVSELWNERPRIATTGTSCLVGVIFQQTLFVANVGDSRVVLGKKFGDTGGIAAIQLSTEHNANLDAIRQELKKSHPHDPQIVVLKDGVWKVKGIIQVSRSIGDVYMKHAQFNRKPINRKFRLPEPMNMPILSASPDIISHPLQSSDSFLIFASAGLWEHLNNEEAVNIVQSNPRPKGSAKRLIKAALEKAAKNEDKQYSELREIKKGGRLKFHGDMTVIVLFLNHDLISSGTVTDPPLSIRSALGS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01373 526 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 137 IPR008808 -
Accr12g01373 526 SUPERFAMILY PP2C-like 207 504 IPR036457 -
Accr12g01373 526 ProSitePatterns PPM-type phosphatase domain signature. 227 235 IPR000222 GO:0043169
Accr12g01373 526 CDD PP2Cc 202 503 IPR001932 -
Accr12g01373 526 Pfam Protein phosphatase 2C 225 473 IPR001932 -
Accr12g01373 526 Coils Coil 464 484 - -
Accr12g01373 526 ProSiteProfiles PPM-type phosphatase domain profile. 198 503 IPR001932 -
Accr12g01373 526 FunFam Probable protein phosphatase 2C 42 192 511 - -
Accr12g01373 526 PANTHER PROTEIN PHOSPHATASE 148 501 IPR015655 GO:0004722|GO:0006470
Accr12g01373 526 SMART PP2C_4 188 501 IPR001932 -
Accr12g01373 526 Gene3D - 193 511 IPR036457 -
Accr12g01373 526 ProSiteProfiles RPW8 domain profile. 1 155 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01373 Accr-Chr12 18137918 18162106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01373 188 454 PP2C-type Phosphatase Gene Family AT3G17090 68.914 4.65e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01373 K01102 - qsa:O6P43_003685 534.643