Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01366 ATGGCGTCACCTCTGATCTCAAATCCTGTAACTACCTCTGATCGGTCCCGCGACGCCTCCAAGAGGAGGAGGAAGAAGAAATCTCCGGCTCAGAAGAATCAACAAGAAGATCAGATTTACAATCACGCCAGATGGAAATCTCAGGTTCAGCAACAAATCTACAAATCCAAGCTACGCCAAGCGTTGGCTCGGCTCAACCTCAATGGCGGCTCTTCCAGCTCCGGCTCCGGCGCCGGCGAGGCTTCTCGACGCGGGAAAGAAGTCCGTGAAGCTGCCGATAGGGTCCTCGCCGTTACTGCCAAAGGGAGGACTCGGTGGAGCAGGGCGATCCTCGCGAATCGGCTCAAGCTGAAGTTCAGGAACCACAAGAGAAAAAAGGTAACGACGGCGACGAGGGTGGCAACTGGAAATTTCCGGTCGAGGAAGCCGAGAGTGAGCGTTTTCCGGTTGAAGGGGAAGACCTTACCGGCTATGCAGAGTAAGGTGAGGTTCCTTGGCCGGTTGGTTCCTGGTTGCCAGAAACAACCCTTTCCGGTGATTCTAGAGGAAACCATCGATTACATATCGGCGGTTCAGATGCAAATCCGAGTCATGACCGATCTCGCCGACCGACTCTCCGCCTCTTCTTCTACCTCCACCTCCGCACCACCTGCCTAA 657 0.5495 MASPLISNPVTTSDRSRDASKRRRKKKSPAQKNQQEDQIYNHARWKSQVQQQIYKSKLRQALARLNLNGGSSSSGSGAGEASRRGKEVREAADRVLAVTAKGRTRWSRAILANRLKLKFRNHKRKKVTTATRVATGNFRSRKPRVSVFRLKGKTLPAMQSKVRFLGRLVPGCQKQPFPVILEETIDYISAVQMQIRVMTDLADRLSASSSTSTSAPPA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01366 218 CDD bHLH_AtIBH1_like 149 202 IPR044549 GO:0006355
Accr12g01366 218 MobiDBLite consensus disorder prediction 66 89 - -
Accr12g01366 218 MobiDBLite consensus disorder prediction 1 44 - -
Accr12g01366 218 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 47 205 IPR044660 GO:0006355
Accr12g01366 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 209 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01366 Accr-Chr12 18030479 18031135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01366 42 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.801 9.13e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01366 - - qsa:O6P43_003690 235.343