Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01363 ATGGAGGAGAATCACAAGAGAGAACCAGACTTCAAGTCGTCTTCTTCTTCTGCGATGGCAACGACATTTTCCGATGAGCTTCTGATCAACCCCACCTTCTTCGATACGTCACCGTTTGGGTCCTACGATCATCGTCGTCATCATTATCATCAAGCTGACGACAACAAAACTAGTAATCATAATTCCTATGGGTTCATGGACCTGCTGGGTGTTCAAGATTATGGTACCCCTTCTTTGTTCGATTGGCTTCCGGCCACCGCCACTACCCCAGCGTCGTCATCGGTAGCAGCTGATGTAGCCCACCAGTCCCTCCCGTCGCCGGCAACCGGGGTGCTGAACACTCCGGCGCCCTCCCCGAATTCCTCCTCGCTTTCGTCCTCGTCCAACACTGCCGCCGCGGGAGTAGGCGGCGGTAGTGTGGAGGAAGAACAGCAGAGTATTAAAGCAGAGGATGAAGATGTCGACGACGGTGGAAGAGGAGACGACCAAGAACAAGACAAATCTAAGGAACAGGAGATGAAACCAAAAAAGAAGAAGCAAAAGAAGGAAAAAGAGCCAAGGTTTGCGTTCATGACGAAAAGCGAGGTTGATCACCTAGACGATGGCTATAGGTGGCGTAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGCTATTATCGATGCACGACGGTTGGTTGCGGAGTGAAGAAGAGGGTGGAGCGGTCGTCGGACGATCCTACCATCGTAGTGACAACCTACGAGGGGCAGCACAAGCATCCAAGTCCGGCAGCGGCGACTCGGGCCGGCCTGGTAGGGTATGGCGGGGGTTTTGGTTCGGTGAATTTGGTGGTTCCACAGCCTTATGATCATCATCATCATCATCAGTTTCAGCAGCAGAGCATAAATGTTTTGTCTTCTTCTTCTTCGCCAATGCTGTATAACTCAAGCAACTATGTCACAAATATGAACTCGTCGATGACGACGGCGTCGTTTTTGAGGTCGTACCATAACAGATCAGGTTTTGGAGTAGTAGGGTCGAGAATGGATGATGAAGCTAGTTTGTTAAGAGACAATGGGCTTCTTCAGGACATTATCGTACCATCGCAGAAGATGAACAATGATGATCCAAAGCAGTTATGA 1131 0.5013 MEENHKREPDFKSSSSSAMATTFSDELLINPTFFDTSPFGSYDHRRHHYHQADDNKTSNHNSYGFMDLLGVQDYGTPSLFDWLPATATTPASSSVAADVAHQSLPSPATGVLNTPAPSPNSSSLSSSSNTAAAGVGGGSVEEEQQSIKAEDEDVDDGGRGDDQEQDKSKEQEMKPKKKKQKKEKEPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSDDPTIVVTTYEGQHKHPSPAAATRAGLVGYGGGFGSVNLVVPQPYDHHHHHQFQQQSINVLSSSSSPMLYNSSNYVTNMNSSMTTASFLRSYHNRSGFGVVGSRMDDEASLLRDNGLLQDIIVPSQKMNNDDPKQL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01363 376 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 297 IPR044810 GO:0003700
Accr12g01363 376 SMART WRKY_cls 199 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01363 376 FunFam WRKY transcription factor 57 185 259 - -
Accr12g01363 376 MobiDBLite consensus disorder prediction 106 134 - -
Accr12g01363 376 Gene3D WRKY domain 186 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01363 376 ProSiteProfiles WRKY domain profile. 194 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01363 376 Pfam WRKY DNA -binding domain 200 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01363 376 MobiDBLite consensus disorder prediction 160 189 - -
Accr12g01363 376 SUPERFAMILY WRKY DNA-binding domain 191 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01363 376 MobiDBLite consensus disorder prediction 106 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01363 Accr-Chr12 17912294 17914275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01363 50 292 WRKY Transcription Factor Family AT4G18170 38.462 4.24e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr12g01363 WRKY 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01363 - - pcin:129319667 294.664