Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01337 ATGTTTGGACTGAAGATGCCTAGTTTAGTTGCATGCATGAATATTATTCTTTATTTTTTGTCCCTGTTTTTATGCCCTTCAGCTATTCTGTTCATTAAAGCATCAGAAACAAATGCAGAACCTTATGAACATGATAGGGTAGTTAATCTTCCTGGCCAACCTTCAAATCCCTCAGTCTCACAATTTTCAGGTTACATCACTGTCAATAAAGATCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAATCATCCAAGAAGCCTCTCCTCCTCTGGCTCAATGGAGGTCCTGGATGCTCATCAGTTGGTGCTGGTGCGGCCGTTGAAATTGGACCTCTTACTGTCACAAAAAATGGTGAAGGGTTGCATTTCAACACCTATTCCTGGAATCGAGAGGCAAATTTGTTATTTGTGGAGTCACCAGTGGGAGTTGGTTTTTCTTACACAAACACATCTTCTGATCTCAACATATTAGATGATAGTTTTGTGGCTGAGGATTCCTACAATTTCTTGGTAAATTGGCTGCAAAGGTTCCCACAGTTTAAATCTCGAGAATTCTTTATATCAGGAGAGAGTTATGCTGGTCACTACATCCCCCAGCTGGCAGAGCTCATCTTTGATCGAAATAAAGATAGAAGCAAATACTCATTTATCAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACTGAAGATTACTATGACAATACAGGCCTCCTGGAATATGCCTGGAGTCATGCAGTCACATCAGATCAGCAATATGAAAAGGCAAAACAAGTATGTGACTTTAAGCAATTTAATTGGTCTGAGGAATGCAATGAGGCCATGGATGTGGTCTACAATGAGTACTCAGAGATAGACATCTACAACATTTATGGCCCTGCGTGTCTACTAAATAGCACCTCCTCTACAGTTAATGATAGTAGAAGTAGAAGATCCAAATCACTCTCTGAGGGGAGAAATGGTCATAGACTAAGGATGATGAGAATTTTCGGCGGCTATGATCCATGTTATGCCATATACGTAGAAGAATATTTCAATAGGATTGATGTTCAGTCATCATTTCATGCTGATATCAAAGGGAGAAACACTAATTTTACGTGGGAACCTTGCAATGATTTCATATTAAACACGTATAACTACTCTGTTTTCTCTGTCCTGCCCATCTACACAAAACTCATCAACGGTGGACTCAAGGTGTGGGTTTATAGTGGGGATGCAGATGGTAGAGTACCAGTGATAGGAACGAGATACTGGATTGAGGCTCTTGGATTGCCTGTCAAGTCTAGTTGGCGAACTTGGTACCATGATAATCAGGTGGGAGGAAGGATAGTGGAGTATGAAGGGCTCACATTTGTGACAATAAGAGGAGCTGGTCATTTGGTGCCACTCTACAAACCCAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTATCAGGAAAGCATCTCCCTACTCATCCATGA 1473 0.4121 MFGLKMPSLVACMNIILYFLSLFLCPSAILFIKASETNAEPYEHDRVVNLPGQPSNPSVSQFSGYITVNKDHGRALFYWFFEAQSESSKKPLLLWLNGGPGCSSVGAGAAVEIGPLTVTKNGEGLHFNTYSWNREANLLFVESPVGVGFSYTNTSSDLNILDDSFVAEDSYNFLVNWLQRFPQFKSREFFISGESYAGHYIPQLAELIFDRNKDRSKYSFINLKGFIVGNPETEDYYDNTGLLEYAWSHAVTSDQQYEKAKQVCDFKQFNWSEECNEAMDVVYNEYSEIDIYNIYGPACLLNSTSSTVNDSRSRRSKSLSEGRNGHRLRMMRIFGGYDPCYAIYVEEYFNRIDVQSSFHADIKGRNTNFTWEPCNDFILNTYNYSVFSVLPIYTKLINGGLKVWVYSGDADGRVPVIGTRYWIEALGLPVKSSWRTWYHDNQVGGRIVEYEGLTFVTIRGAGHLVPLYKPSEALSLIHSFLSGKHLPTHP 490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01337 490 FunFam Carboxypeptidase 41 301 - -
Accr12g01337 490 Pfam Serine carboxypeptidase 51 483 IPR001563 GO:0004185|GO:0006508
Accr12g01337 490 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Accr12g01337 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Accr12g01337 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Accr12g01337 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Accr12g01337 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 202 IPR001563 GO:0004185|GO:0006508
Accr12g01337 490 SUPERFAMILY alpha/beta-Hydrolases 47 486 IPR029058 -
Accr12g01337 490 Gene3D - 389 483 - -
Accr12g01337 490 FunFam Carboxypeptidase 338 486 - -
Accr12g01337 490 FunFam Carboxypeptidase 389 483 - -
Accr12g01337 490 Gene3D - 340 378 - -
Accr12g01337 490 Gene3D alpha/beta hydrolase 41 301 IPR029058 -
Accr12g01337 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 453 470 IPR033124 GO:0004185
Accr12g01337 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 47 470 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr12g01337 Accr-Chr12 17356758 17360777 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01337 371 486 Calmodulin-binding Proteins AT2G22960 34.188 3.87e-16 74.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01337 K16297 - gmx:100815141 788.104