LGRPv2

Gene search

Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr12g01329	238	PRINTS	CCAAT-binding transcription factor subunit B signature	78	100	IPR001289	GO:0003700\|GO:0006355
	Accr12g01329	238	PRINTS	CCAAT-binding transcription factor subunit B signature	109	132	IPR001289	GO:0003700\|GO:0006355
	Accr12g01329	238	MobiDBLite	consensus disorder prediction	163	196	-	-
	Accr12g01329	238	Gene3D	-	75	137	-	-
	Accr12g01329	238	ProSiteProfiles	NF-YA/HAP2 family profile.	75	135	IPR001289	GO:0003700\|GO:0006355
	Accr12g01329	238	SMART	cbf3	74	135	IPR001289	GO:0003700\|GO:0006355
	Accr12g01329	238	PANTHER	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	12	195	IPR001289	GO:0003700\|GO:0006355
	Accr12g01329	238	MobiDBLite	consensus disorder prediction	175	196	-	-
	Accr12g01329	238	ProSitePatterns	NF-YA/HAP2 subunit signature.	80	100	IPR018362	GO:0003677\|GO:0016602
	Accr12g01329	238	Pfam	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	78	132	IPR001289	GO:0003700\|GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr12g01329	Accr-Chr12	17264306	17265832	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr12g01329	25	141	CCAAT-HAP2 Transcription Factor Family	AT1G17590	62.185	3.98e-42	144

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NF-YA	Accr12g01329		CBFB_NFYA	3.2e-27	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr12g01329	K08064		-	gmx:100793856	313.923

Showing 1 to 1 of 1 entries