Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01318 ATGGTTTGGTTTCAATGCGAGGATTGTGGTGACAATTTGAAGAAACCCAAGTTACCGAATCATTTCAGAACCTGTTCTGCTTTTAAGTTGTCATGTATTGATTGTGGACAAATATTTGGACAAGACACAGTTCAGCAACACACACAATGTATTACAGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGAAAAACTTTAAATGGTACAGCTGCCAAACCTAACAATAATAACAAGCAAAAGCCTGAAGTTGATATTCATGTTGGGTTATCAGAAAGGCCTCCATGGTTTTGTAGCCTCTGCAACACTAAAGCTACGAGTCAGCAAACACTTCTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAAGTTCGGGCATTCCTTGCTTCCAAGCAACAACCAATTCAGACAGAAACATCTGCTCTGGATGCAAAGCTTCCAGTGGAACATGCTTCTAATGGTCAGGTCCAAGTCAGCAATAATGTAGAGCAGAAAAAATTGCAAGATCCATCTGAATGCAATAACTTGAAATCTGGGAATGAAATCTCTCCATCAAATAAAAAGAGGAAATCTGATGTGGTGGAGGATAACCCTATAAGGAAAAAAGGCAGGGATGACAGTCCAGGTGAGTTGGGAAATGGGGAAGTAGTTCAGGCTGAAGGAGCAGAAGCTGGGGAAAATTCTCATTTGAAGAAAGAAAAGATGGTTAACGACAAGAAGAATATAAAGTGGAAAAAGTTTATCAAATCAGCATTGAAATCTCATCCTGATGGAAAATTGAAGATGAAGAAGTTGAGAAAACATGTCTTGAAGGCCTTGCAGGAATCTGGTGTTGAAGTGGATGAAACTGAACTTAGTGAAGCACTTGAGCTTAAGATCAATTCAAGTTCCAGATTTGCAGTTGAGAAGAAGTATGTACGTTTGGTGGCCAAGGATGGTAAGGAGTAG 945 0.4011 MVWFQCEDCGDNLKKPKLPNHFRTCSAFKLSCIDCGQIFGQDTVQQHTQCITEAEKYGPKGQGKTLNGTAAKPNNNNKQKPEVDIHVGLSERPPWFCSLCNTKATSQQTLLLHADGKKHRAKVRAFLASKQQPIQTETSALDAKLPVEHASNGQVQVSNNVEQKKLQDPSECNNLKSGNEISPSNKKRKSDVVEDNPIRKKGRDDSPGELGNGEVVQAEGAEAGENSHLKKEKMVNDKKNIKWKKFIKSALKSHPDGKLKMKKLRKHVLKALQESGVEVDETELSEALELKINSSSRFAVEKKYVRLVAKDGKE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01318 314 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Accr12g01318 314 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Accr12g01318 314 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 308 IPR039999 GO:0003677
Accr12g01318 314 MobiDBLite consensus disorder prediction 61 80 - -
Accr12g01318 314 FunFam UBP1-associated proteins 1C 89 132 - -
Accr12g01318 314 MobiDBLite consensus disorder prediction 182 208 - -
Accr12g01318 314 MobiDBLite consensus disorder prediction 151 181 - -
Accr12g01318 314 Gene3D - 1 50 - -
Accr12g01318 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Accr12g01318 314 MobiDBLite consensus disorder prediction 143 213 - -
Accr12g01318 314 SUPERFAMILY beta-beta-alpha zinc fingers 84 128 IPR036236 -
Accr12g01318 314 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Accr12g01318 314 Pfam Zinc-finger of C2H2 type 95 119 - -
Accr12g01318 314 Gene3D Classic Zinc Finger 89 130 - -
Accr12g01318 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Accr12g01318 314 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Accr12g01318 314 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01318 1 142 C2H2 Transcription Factor Family AT2G19380 48.592 5.18e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01318 K15263 - gmx:100790272 417.157