Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01315 ATGAATAGAGGAAGCTTAGGCCCAAATCTCAAACTCACTGTTCCTGCACCTGATCAAGTTTTCTTGACTGAGAGCGCGACCTTCAGGGAGGGGGATCTTCTGGTCAATAAGTATGGCGTTCGAATTATCTCTCAGAATGAAGTGGAAGCTTTACCCCCTATCAAGGCAAAAGACAACCAGTTAAGTTTAGAAGACATAGTCGCAATCAAAGTGGTTGGAAAGGGAAGCGGCGGTATTGTGCAATTGGTGCAACACAAATATACTAATCAGTTTTTTGCATTGAAGGTAATTCAAGTGGCTATTGACGAGCCTATGCGCAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCTCAATGTCCCTATGTGGTTGTCTGTTACCAGTCCTTCTATTTAAATAATGTTATATCAATCGTCTTAGAGTACATGGATGGAGGGTCTTTGGAAGATTTTCTCAAGAAAGTGAAATCAATTCCAGAGGCATATCTTGCTGCCATTTGCAAGCAGGTGCTGAAGGGTTTAACGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTCAGTGCAATAATGGAAAGTACATCTGGTCAAGCGAACACTTTCATTGGAACACGTATCTATATGTCTCCAGAGAGAATCAATGGATTCCAGCGTGGCTACAACTACAAATGTGACATATGGAGTTTGGGATTAATATTGCTTGAGTGTGCTACAGGGAGGTTTCCATATACACCGCCTGATCAAGGAGAAAGATGGGAAAATGTATTTCAGCTTATCGAAGCTGTTGTTGAATCTCCTCCTCCCTCAGCTCCACCTGATCAATTTTCTCCAGAGTTCTGCTCATTTGTTTCAGCATGTTTGTGGAAAAATCCAAAGAACAGATGGTCAGCTCAAGAACTTTTGAGACATCCATTTATCAATATGTACGAGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAACGCAGGATCTCCCCTTGCTACTCTATAA 1059 0.4127 MNRGSLGPNLKLTVPAPDQVFLTESATFREGDLLVNKYGVRIISQNEVEALPPIKAKDNQLSLEDIVAIKVVGKGSGGIVQLVQHKYTNQFFALKVIQVAIDEPMRKQIAQELKINQSAQCPYVVVCYQSFYLNNVISIVLEYMDGGSLEDFLKKVKSIPEAYLAAICKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTRIYMSPERINGFQRGYNYKCDIWSLGLILLECATGRFPYTPPDQGERWENVFQLIEAVVESPPPSAPPDQFSPEFCSFVSACLWKNPKNRWSAQELLRHPFINMYEDLDVDLSAYFSNAGSPLATL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01315 352 Gene3D Transferase(Phosphotransferase) domain 1 146 348 - -
Accr12g01315 352 Pfam Protein kinase domain 69 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01315 352 FunFam Mitogen-activated protein kinase kinase 6 147 347 - -
Accr12g01315 352 Gene3D Phosphorylase Kinase; domain 1 37 145 - -
Accr12g01315 352 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 56 344 - -
Accr12g01315 352 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Accr12g01315 352 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01315 352 SUPERFAMILY Protein kinase-like (PK-like) 58 334 IPR011009 -
Accr12g01315 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Accr12g01315 352 CDD PKc_MAPKK_plant_like 64 332 - -
Accr12g01315 352 FunFam Mitogen-activated protein kinase kinase 6 36 145 - -
Accr12g01315 352 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01315 Accr-Chr12 16998213 17001300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01315 23 350 MAP Kinase Kinase Gene Family AT4G26070 63.444 3.02e-157 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Accr12g01315 Pkinase 1.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01315 K20603 - qsa:O6P43_002713 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g01315 12 16998213 17001300 Accr12g01315 12 16998213 17001300 ECH