Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01314 ATGCACACAGAGGTGGCGAATCGCATCAGAAAACCCACGATCATGAATAGAGGAAGCTTAGGCCCAAATCTCAAACTCACTGTTCCTGCACCTGATCAAGTTTTCTTGACTGAGAGCGCGACCTTCAGGGAGGGGGATCTTCTGGTCAATAAGTATGGCGTTCGAATTATCTCTCAGAATGAAGTGGAAGCTTTACCCCCTATCAAGGCAAAAGACAACCAGTTAAGTTTAGAAGACATAGTCGCAATCAAAGTGGTTGGAAAGGGAAGCGGCGGTATTGTGCAATTGGTGCAACACAAATATACTAATCAGTTTTTTGCATTGAAGGTAATTCAAGTGGCTATTGACGAGCCTATGCGCAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCTCAATGTCCCTATGTGGTTGTCTGTTACCAGTCCTTCTATTTAAATAATGTTATATCAATCGTCTTAGAGTACATGGATGGAGGGTCTTTGGAAGATTTTCTCAAGAAAGTGAAATCAATTCCAGAGGCATATCTTGCTGCCATTTGCAAGCAGGTGCTGAAGGGTTTAACGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTCAGTGCAATAATGGAAAGTACATCTGGTCAAGCGAACACTTTCATTGGAACACGTATCTATATGTCTCCAGAGAGAATCAATGGATTCCAGCGTGGCTACAACTACAAATGTGACATATGGAGTTTGGGATTAATATTGCTTGAGTGTGCTACAGGGAGGTTTCCATATACACCGCCTGATCAAGGAGAAAGATGGGAAAATGTATTTCAGCTTATCGAAGCTGTTGTTGAATCTCCTCCTCCCTCAGCTCCACCTGATCAATTTTCTCCAGAGTTCTGCTCATTTGTTTCAGCATGTTTGTGGAAAAATCCAAAGAACAGATGGTCAGCTCAAGAACTTTTGAGACATCCATTTATCAATATGTACGAGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAACGCAGGATCTCCCCTTGCTACTCTATAA 1101 0.4169 MHTEVANRIRKPTIMNRGSLGPNLKLTVPAPDQVFLTESATFREGDLLVNKYGVRIISQNEVEALPPIKAKDNQLSLEDIVAIKVVGKGSGGIVQLVQHKYTNQFFALKVIQVAIDEPMRKQIAQELKINQSAQCPYVVVCYQSFYLNNVISIVLEYMDGGSLEDFLKKVKSIPEAYLAAICKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTRIYMSPERINGFQRGYNYKCDIWSLGLILLECATGRFPYTPPDQGERWENVFQLIEAVVESPPPSAPPDQFSPEFCSFVSACLWKNPKNRWSAQELLRHPFINMYEDLDVDLSAYFSNAGSPLATL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01314 366 Gene3D Transferase(Phosphotransferase) domain 1 160 362 - -
Accr12g01314 366 ProSiteProfiles Protein kinase domain profile. 80 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01314 366 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Accr12g01314 366 CDD PKc_MAPKK_plant_like 78 346 - -
Accr12g01314 366 SUPERFAMILY Protein kinase-like (PK-like) 72 348 IPR011009 -
Accr12g01314 366 Pfam Protein kinase domain 83 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01314 366 Gene3D Phosphorylase Kinase; domain 1 51 159 - -
Accr12g01314 366 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 67 358 - -
Accr12g01314 366 FunFam Mitogen-activated protein kinase kinase 6 161 361 - -
Accr12g01314 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Accr12g01314 366 FunFam Mitogen-activated protein kinase kinase 6 50 159 - -
Accr12g01314 366 SMART serkin_6 80 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01314 Accr-Chr12 16998213 17001342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01314 37 364 MAP Kinase Kinase Gene Family AT4G26070 63.444 4.17e-157 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Accr12g01314 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01314 K20603 - qsa:O6P43_002713 555.058