Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01313 ATGGAGGAAATATCTTCTGCTGTTGCAGTACCATTTACACTTGGCAAGTTGACTCAGGAGTCATCAGTAACAACAACCCACATGGAGATATCTGGGTTGAAGCTTATGGCTAATACAGCAGCAACTTTGATTTTGAATCCTGCAATGGAGGATTGTGAAAATCAAAGGGTTTTAAGTTCACAGAATCAGATTACTGTATCTCCAGAAAAAAAGGAGAATCATGTTGTTGGAGATTCCCTTGTTTCAGATTTGACTACTGGACGTGACAGAAATTGGGTTGGGAATGAAACCAACAATCAGAAATGCAAGGAAGATGATTTTGAATGTCCAAATGATTCAAGCTATCGAACTGTTTCTGGGGACCAATCTCCAACTTTGAGGACTAACTGTTCTGAGATTGATCAACCAATTAGTACCATCAAGGTTGAAGAAGATGATGATATAGTACTAAAGCCAGTGAAGAGAATGGTCTCTGTTGAAATGGATATTGAGATTTATGATGGAAGTAGATCAGATAGATGTGATTCTAAGCCATCAGATTCTGTTGCAATTTCAGAGGATAAAATATGCAGAGGGAGCTACCAGAATGGATTAGAAATGAATAGTGGGGCCCTTTGGGGATTTTCATCAATCTGTGGAAGAAGAGATGAGATGGAAGATGCTATTGCTGTTGCGCCTCAACTCTTGCAAGTCCCTTCACAGATGCTAATGGAAAACCATGTGACTGAAATCCCAAAATACTCAGAAGCACACTTTTTTGGTGTCTATGATGGACATGGGGGCTGCCAGGTTGCTAATTACTGCCGGGAACGTCTCCATTCAGTGTTGATTGAGGAGATAGAGGCTGCAGGAACAAGCTTTGGAGAAAACTGGCAGGAGCATTGGAAGAAAGCATTATGCAAGTGTTTTCGGAGAGTTGATGATGAGGTTGATGGAAAAAGTGAAGCTAATAATAATGAAGACAACAATCATGAATCTGAGTCTGGTTCTGAACCTCTTGCTCCTGAAACTGTTGGTTCTACTGCTGTGGTTGCCATTTTGAGTCAAACCCACATAATAGTGGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGCGGAAAAGAAGCCATTCCACTGTCTGCTGATCACAAACCAAATAGGGAGGATGAGTGGACAAGAATAGAAGCTGCAGGAGGAAGGGTCATACAGTGGAATGGGTACAGAGTTCTTGGGGTTTTAGCAGTCTCAAGGTCCATAGGTGACAGATATTTGAAACCATGGATAATTCCTGAACCAGAAATAGAGTTGATCCTTAGAGAGAAAAATGATGAGTGCCTTATTCTAGCCAGTGATGGTCTATGGGATGTGATGACAAATAAAGAAGCCTGCCAGGCTGCAAGAAACAGGATCCTTCTTTGGCACAAAAAATATGGCAATGGCAACAACAACAACAACGGATCTGATGAACAAGAAGAAGAACTGGGACTTGATCCTGCAGCTCAGTTTGCTGCAGAGTATCTATCTAGACTTGCCCTTCAAAGGGGAAGTAAAGATAACATATCTGTTATTGTGGTAGACTTGAAGGCACAAAGAAAATCTAAGACAGGGCTTAAAGCATATTTACCTATATCATCTGTGAAAAGATGA 1629 0.4119 MEEISSAVAVPFTLGKLTQESSVTTTHMEISGLKLMANTAATLILNPAMEDCENQRVLSSQNQITVSPEKKENHVVGDSLVSDLTTGRDRNWVGNETNNQKCKEDDFECPNDSSYRTVSGDQSPTLRTNCSEIDQPISTIKVEEDDDIVLKPVKRMVSVEMDIEIYDGSRSDRCDSKPSDSVAISEDKICRGSYQNGLEMNSGALWGFSSICGRRDEMEDAIAVAPQLLQVPSQMLMENHVTEIPKYSEAHFFGVYDGHGGCQVANYCRERLHSVLIEEIEAAGTSFGENWQEHWKKALCKCFRRVDDEVDGKSEANNNEDNNHESESGSEPLAPETVGSTAVVAILSQTHIIVANCGDSRAVLCRGKEAIPLSADHKPNREDEWTRIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEIELILREKNDECLILASDGLWDVMTNKEACQAARNRILLWHKKYGNGNNNNNGSDEQEEELGLDPAAQFAAEYLSRLALQRGSKDNISVIVVDLKAQRKSKTGLKAYLPISSVKR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01313 542 FunFam Protein phosphatase 2C 51 198 529 - -
Accr12g01313 542 SUPERFAMILY PP2C-like 201 522 IPR036457 -
Accr12g01313 542 SMART PP2C_4 195 519 IPR001932 -
Accr12g01313 542 ProSiteProfiles PPM-type phosphatase domain profile. 205 521 IPR001932 -
Accr12g01313 542 MobiDBLite consensus disorder prediction 312 335 - -
Accr12g01313 542 CDD PP2Cc 207 521 IPR001932 -
Accr12g01313 542 ProSitePatterns PPM-type phosphatase domain signature. 252 260 IPR000222 GO:0043169
Accr12g01313 542 PANTHER PROTEIN PHOSPHATASE 168 521 IPR015655 GO:0004722|GO:0006470
Accr12g01313 542 Gene3D - 194 530 IPR036457 -
Accr12g01313 542 SMART PP2C_SIG_2 239 521 IPR001932 -
Accr12g01313 542 MobiDBLite consensus disorder prediction 312 327 - -
Accr12g01313 542 Pfam Protein phosphatase 2C 207 514 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01313 Accr-Chr12 16992755 16995735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01313 90 529 PP2C-type Phosphatase Gene Family AT4G26080 49.775 9.43e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01313 K14497 - gmx:100812974 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01443 8 35326913 35329330 Accr12g01313 12 16992755 16995735 CCT