Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01308 ATGGAGGACGATCGGGTGGAGAAGGAGGAGGAGGAGGACAATGTGGGACCCATGGCTGGGGAGGAAGAAGAACGAGAGGTATGCTCAAGCTTGACCATGGAGAGGGTCGCTGTTGCTAAGAAGTTCATCGAGAATCATTACAGAGCTCAGATGAAGCTGATAAAAGATCGCAAAGAGAGGCGTTCAGTGCTGGAAAAGAAGTTAGCATCTTCTCGTGTACCAGAAGAAGAACAGATACATCAACTGAAGGATTTAGAGCGCAAGGAGACAGAGTATATACGGTTCAAACGACACAAAATATGCGTCAGTGATTTTCACCTTCTAGATATTATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTTTGCCGCGAGAAAAAATCAGGCAATATTTATGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAGAGCTGAGCGGAACTTATTAGCAGAAGTTGCGAGTCATTACATTGTGAAACTCTATTACTCCTTTCAGGATGCTGATTACTTATATCTGATAATGGAATATTTACCTGGTGGTGATTTAATGACTTTGCTGATTAGAGAAGAAACTTTGACTGAAAGTGTGGCTAGATTTTACATCGCACAAAGCGTTTTGGCCATAGAATCTATTCATAAACACCATTACATTCATCGTGATATAAAACCTGACAACCTTCTGCTGGACAAAAAAGGTCATACGAAACTCTCTGATTTTGGTCTTTGTAAGCCACTTGATTGCACAAATTTTTCATCAATAAATGAAGGTGAAGTCTTAGATGATGAGAACTTGATTGATACCATGGATATTGATGAATCTTTACCAAATTCTAAATGTGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAAAAAACAGGAGGAAGTTGGCATTTTCTACAGTGGGAACGCCAGACTATATTGCTCCTGAAGTGTTGCTTAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCGATCATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCTGATGATCCAGTAACAACGTGTAGAAAGATTGTACATTGGAAACATCATTTAAAATTTCCAGAGGAGGCAAGGTTGACACCTGAGGCAATGAATCTGATCTGTAGGTTGCTTTGTGAAGCTGACCAAAGACTTGGTACTAGAGGGGCAGATGAAATTAAAGGACATCCTTGGTTCAGAGATGTTGTATGGGATAAACTCTATGACTTGGAAGCAGCATTCAAACCACAAGTCAATGGAGAGCTTGACACACAAAATTTTATGAAATTTGACGAGGTTGAACAACCAAAACCAACTAGAGCTGGATCCGGTCCCATCAGAAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAACTTTGACGCGGTCAAGGGTATGCATCATGCCATGGATAGGGGTATGAGGAGCATGTCATCACCTATTCCACCGGTCACTGAACCTCCACAGAGTGATTCTGGAAAAGACTATTCCTCAGGATATTCGAGCCGGTAG 1569 0.4194 MEDDRVEKEEEEDNVGPMAGEEEEREVCSSLTMERVAVAKKFIENHYRAQMKLIKDRKERRSVLEKKLASSRVPEEEQIHQLKDLERKETEYIRFKRHKICVSDFHLLDIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHYIVKLYYSFQDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYIAQSVLAIESIHKHHYIHRDIKPDNLLLDKKGHTKLSDFGLCKPLDCTNFSSINEGEVLDDENLIDTMDIDESLPNSKCGRRWKSPLEQLQHWQKNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKHHLKFPEEARLTPEAMNLICRLLCEADQRLGTRGADEIKGHPWFRDVVWDKLYDLEAAFKPQVNGELDTQNFMKFDEVEQPKPTRAGSGPIRKMLLTPQDLSFVGYTYKNFDAVKGMHHAMDRGMRSMSSPIPPVTEPPQSDSGKDYSSGYSSR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01308 522 Gene3D Transferase(Phosphotransferase) domain 1 191 429 - -
Accr12g01308 522 ProSiteProfiles Protein kinase domain profile. 105 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01308 522 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Accr12g01308 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 447 - -
Accr12g01308 522 Gene3D Phosphorylase Kinase; domain 1 95 190 - -
Accr12g01308 522 SMART pkinase_C_6 413 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr12g01308 522 MobiDBLite consensus disorder prediction 1 26 - -
Accr12g01308 522 FunFam Non-specific serine/threonine protein kinase 311 430 - -
Accr12g01308 522 ProSiteProfiles AGC-kinase C-terminal domain profile. 413 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr12g01308 522 FunFam Non-specific serine/threonine protein kinase 431 441 - -
Accr12g01308 522 CDD STKc_NDR_like 103 477 - -
Accr12g01308 522 SUPERFAMILY Protein kinase-like (PK-like) 102 474 IPR011009 -
Accr12g01308 522 MobiDBLite consensus disorder prediction 1 19 - -
Accr12g01308 522 FunFam Non-specific serine/threonine protein kinase 66 188 - -
Accr12g01308 522 SMART serkin_6 105 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01308 522 CDD MobB_NDR_LATS-like 39 100 - -
Accr12g01308 522 MobiDBLite consensus disorder prediction 492 522 - -
Accr12g01308 522 FunFam Non-specific serine/threonine protein kinase 189 256 - -
Accr12g01308 522 Pfam Protein kinase domain 105 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01308 522 Pfam Protein kinase domain 309 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01308 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01308 Accr-Chr12 16918419 16929714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01308 6 493 AGC Kinase Gene Family AT4G33080 73.824 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Accr12g01308 Pkinase 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01308 K08790 - jre:109009023 837.41