Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01301 ATGGTTGAGTTCCCCTCAATTCCTGCTCTTCAAGGAGTAAGTCTTAAAGTCTCCACCATAAACTATGAATCTGGCTACTTAGATGTAGAGGATCCAGAAGGTTGTCTTCCCAGACTCTTTCTACAACACCGTCTCTACAATTCATCCATTTATCCTTTAGAGTTTCCTGGTATGAACGAATACAATGTTACATTCTTCAATTGTTCTTCGCTTGGCTTGAGATACCTCAGAAACGAAGACTTTTCCTATTCATCTGAACAAGATATGTTCGCCTGCCCGATTTATGCTGTTTCCTCCGAAGATAGTATCCTGCACTGGGATGTGGCTTTCTGCACCAAGATGTTTCAGCTAGTTTCGCCAATTGACGATTTTTCCCTTCGTTTCAACTTCTTGTTATTGAAATTTCCACAACCAAAATCTGATGTTGAAAAGCACAAAACCAGCAAGATTCCTGAGATTGTTTTACCAGGTTCAATTCTGCTGGTGGTGGTGTGCATTGCAGGCTTTTACATTATTCGCTACTTCAAAGACAGAGGAGAAGATCAGGTGAGATTGGAAAAATTTTTGGAGGATTATAAGGTACAAAAGCCTACAAGATTTTCTTATGATGATCTGAAAAGAATCACAAATCATTTCAAGGATAAATTAGGTGAAGGAGCTCATGGAGAAGTTTTCAAAGGTAAGTTATCTAACGAAATCCAAGTAGCAGTAAAAGTACTCAATAATTCAGATAGTGACGGGCAAGACTTCATCAACGAAGTGGGGACTATGGGTAAAATTCATCATATCAATATTGTTCGTTTGCTAGGTTTTTGCGCGGATGGTTTTCATCGTGCTCTTGTTTATGACTTCTTTTCAAATGGTTCCCTTCAAAAGTTCATATCTTCGCCAGACAACAAAGAAACTTTCCTTGGATGGCTGAAGTTGCAACAGTTAGCCCTTGCCATAGCCAAAGGGATTGAATATCTCCATCAAGGTTGTGACTATCGTATTCTCCACTTTGACATCAATCCTCGTAATGTGTTATTAGATCACAATTTTACTCCCAAAATTTCTGATTTTGGTCTAGCCAAATTGTGTTCTAAAAATCAAAGTACGGTGTCAATGACTGCAGCGAGAGGAACTTTAGGTTATATTGCACCTGAAGTCTTCTCTCGAAACTTTGGGAATGTGTCATATAAATCGGATATTTATAGCTATGGAATGTTACTGCTAGAAATGGTTGGTGGAAGGAAAAATGTCGACACAAATCCAAAAACCTTACGAGTGTTATACCCGGAATGGATCCATAATTTGATTGAAGGAGGCGACATAAGTATTTTTATAGAAAATGAATGTGACCTTAAAATTGCAAGGAAACTAGCAATTGTGGGTCTTTGGTGCATTCAGTGGCATCCAATGAATCGTCCATCTATGAAGAGTGTGATACAAATGTTGGAAGGGGAGGTTGATAAATTAAAGGTGCCTCCTGCTCCATTTGACTTTGCAACTTCAGCCAATACAAGTACCACTATTCCTATGAGACATCTAAACTTAGAGCTAGAAGTGATTCATGAATTAGAATAA 1566 0.3844 MVEFPSIPALQGVSLKVSTINYESGYLDVEDPEGCLPRLFLQHRLYNSSIYPLEFPGMNEYNVTFFNCSSLGLRYLRNEDFSYSSEQDMFACPIYAVSSEDSILHWDVAFCTKMFQLVSPIDDFSLRFNFLLLKFPQPKSDVEKHKTSKIPEIVLPGSILLVVVCIAGFYIIRYFKDRGEDQVRLEKFLEDYKVQKPTRFSYDDLKRITNHFKDKLGEGAHGEVFKGKLSNEIQVAVKVLNNSDSDGQDFINEVGTMGKIHHINIVRLLGFCADGFHRALVYDFFSNGSLQKFISSPDNKETFLGWLKLQQLALAIAKGIEYLHQGCDYRILHFDINPRNVLLDHNFTPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDTNPKTLRVLYPEWIHNLIEGGDISIFIENECDLKIARKLAIVGLWCIQWHPMNRPSMKSVIQMLEGEVDKLKVPPAPFDFATSANTSTTIPMRHLNLELEVIHELE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01301 521 FunFam PR5-like receptor kinase 285 490 - -
Accr12g01301 521 SUPERFAMILY Protein kinase-like (PK-like) 193 480 IPR011009 -
Accr12g01301 521 Pfam Protein tyrosine and serine/threonine kinase 212 479 IPR001245 GO:0004672|GO:0006468
Accr12g01301 521 PANTHER RUST RESISTANCE KINASE LR10-RELATED 184 498 IPR045874 GO:0004672
Accr12g01301 521 Gene3D Transferase(Phosphotransferase) domain 1 285 488 - -
Accr12g01301 521 Gene3D Phosphorylase Kinase; domain 1 184 284 - -
Accr12g01301 521 FunFam serine/threonine-protein kinase PBS1-like 180 284 - -
Accr12g01301 521 ProSiteProfiles Protein kinase domain profile. 210 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01301 521 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01301 Accr-Chr12 16487122 16488811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01301 159 492 Receptor kinase-like Gene Family AT1G66910 47.674 8.03e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01301 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01301 - - tpra:123893290 630.557