Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01299 ATGACCGAAAATTTCAAGAATAAGTTGGGTGAAGGAGGCTTCGCTACTGTGTATAAGGGAAAGCTAAGGAGTGGACCTGACGTTGCTATCAAAATGTTAGGTAAATCCAATAAAGCTAATAATGGCCAAGATTTTATGAGTGAAGTGGCAACTATTGGAAGGATACACCATTTCAATGTGGTACATCTTGTAGGGTTTTGTGTTGAAGGAACAAAGCGTGCTCTTATCTACGAATTTATGTCCCATGGATCTTTAGATAAACATATTTTTTCTAAAGAAGAAAACACGTCCTTGAGTTACCGTAAGATATATGAGATATCTCTAGGAGTGGCTCGTGGGATTGCTTACCTTCATCATGGATGTGACATGCAAATATTGCATTTTGATATCAAGCCTCATAACATTCTTCTTGACGAAAACTTCACTCCAAGAATTTCAGATTTTGGACTAGCATGTTTATATGCAATTGATGGTAATATTGCCACTTTGACAGCGAGAGGAACAATTGGATATATAGCTCCAGAGTTGTTCTACAAGAATATTGGAAGAGTGTCTCATAAGGTTGATGTTTATAGTTTTGGAATGCTTCTAATGGAAATGGCAAGTCAAAGAAGGAATTTGAATCCGCAAGCAGAACATTCGAGCCAACTATACTATCCCTTATGGATTTATGACCAATTTGATGATAATAATGATATAGAAATGGAAGATTTGATGGAAGAAGAAAAGGGTTTAGTAAAGAAGATGTTCATAGTAGCACTCTGGTGCATACAACTAAAGCCTGTTGATCGTCCTTCAATGAACAAAGTAATAGAGATGTTAGAAGCAAATGATGTTTCAAGTCTTCAAATGCCTCCAAAACCTTCTCTATATCCTAATGAGAGAGTTTTAGTGGATGACATATCCAACACTGATGAAACAACATCCATTGATTTTGGACATTCTCATAGTAGTATTGGTGAGGGAACAAGTAATGGAAATTAA 984 0.3618 MTENFKNKLGEGGFATVYKGKLRSGPDVAIKMLGKSNKANNGQDFMSEVATIGRIHHFNVVHLVGFCVEGTKRALIYEFMSHGSLDKHIFSKEENTSLSYRKIYEISLGVARGIAYLHHGCDMQILHFDIKPHNILLDENFTPRISDFGLACLYAIDGNIATLTARGTIGYIAPELFYKNIGRVSHKVDVYSFGMLLMEMASQRRNLNPQAEHSSQLYYPLWIYDQFDDNNDIEMEDLMEEEKGLVKKMFIVALWCIQLKPVDRPSMNKVIEMLEANDVSSLQMPPKPSLYPNERVLVDDISNTDETTSIDFGHSHSSIGEGTSNGN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01299 327 MobiDBLite consensus disorder prediction 307 327 - -
Accr12g01299 327 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 295 IPR045874 GO:0004672
Accr12g01299 327 Gene3D Transferase(Phosphotransferase) domain 1 80 284 - -
Accr12g01299 327 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Accr12g01299 327 ProSiteProfiles Protein kinase domain profile. 3 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01299 327 PIRSF ILK 3 281 - -
Accr12g01299 327 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Accr12g01299 327 Pfam Protein kinase domain 6 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01299 327 FunFam PR5-like receptor kinase 80 286 - -
Accr12g01299 327 SUPERFAMILY Protein kinase-like (PK-like) 5 275 IPR011009 -
Accr12g01299 327 SMART serkin_6 3 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01299 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01299 Accr-Chr12 16458875 16459858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01299 1 316 Receptor kinase-like Gene Family AT5G38280 47.826 8.37e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01299 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01299 - - pcin:129321062 473.781