Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01296 ATGACTCCAGGTTCCATTGTGCTTCTTTTGCTGTTGGTTGTGTGCTTCTACATATGCCACTACTTCAAGCACAAAGGCGAAGACCAAGTCAGACTCGAAACGTTTTTGAAGGATTACCAGGCACTTAAGCCTACTAGATTCTCTTATGCTGATATTAAAAGAATCACTCACAAATTCAAGGATACATTAGGTGAAGGTGCACATGGAACTGTCTTTAAAGGTAAGCTATCTACTGAAATTCAAGTGGCTGTCAAAGTACTCAATAATTCAGATTATGATGGAAAAGACTTCATTAATGAAATGGGGACAATGGGCAAAATTCATCACATCAATGTTGTTCGTTTGTTGGGCTTTTGTGCCGATGGTTGTCGCCGAGCTCTTGTTTATGACTTCTTTCCGAATGGTTCCCTCCAAAAGTTCATCTCTTCACCGGACAACAAAGAAATTTTCTTGGGATGGTCAAAACTACAACAAATTGCTCTTGACATAGCAAAGGGGATTGAATATCTTCACCAAGCCTGTGATTATAGAATCCTTCATTTTGATATAAATCCTCGTAATGTGTTATTAGATAGCAATTTCACCCCCAAAATTTCTGACTTTGGTCTAGCTAAATTGTGTTCTAAAGATCGAAGTACTATATCAATGACTGTAGCAAAAGGAACATTAGGATATATTGCACCAGAGGTTTTCTCTCGAAACTTTGGAAATGTGTCATACAAATCAGATATTTATAGTTATGGAATGCTTCTCCTAAAAATGGTTGGTGGAAGGAAAAATGTTGATACAAATCAAGTTCTATATCCAGAATGGATCCACTATTTGATTGAAGGAGGAGATGTAAGTATCTACATAGAAGATGAAGTTGACATTAGAATTGCTAAGAAACTAGCAATTATAGGACTTTGGTGCATTCAATGGCATTCAATAAATCGTCCATCCATGAAAACAGTGATACAAATGCTAGAAGGAAAAGTAGATAAATTAAAAGTGCCTCCTACTCCTTTTGATTTCACTACGTCAATCAATATAAACACTGTTATTCTAGTAAGACATGTGAATTTAGAGTTAGACGTAATTCATGAACTAAAATAA 1095 0.3589 MTPGSIVLLLLLVVCFYICHYFKHKGEDQVRLETFLKDYQALKPTRFSYADIKRITHKFKDTLGEGAHGTVFKGKLSTEIQVAVKVLNNSDYDGKDFINEMGTMGKIHHINVVRLLGFCADGCRRALVYDFFPNGSLQKFISSPDNKEIFLGWSKLQQIALDIAKGIEYLHQACDYRILHFDINPRNVLLDSNFTPKISDFGLAKLCSKDRSTISMTVAKGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLKMVGGRKNVDTNQVLYPEWIHYLIEGGDVSIYIEDEVDIRIAKKLAIIGLWCIQWHSINRPSMKTVIQMLEGKVDKLKVPPTPFDFTTSININTVILVRHVNLELDVIHELK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01296 364 FunFam serine/threonine-protein kinase PBS1-like 26 131 - -
Accr12g01296 364 ProSiteProfiles Protein kinase domain profile. 57 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01296 364 Gene3D Phosphorylase Kinase; domain 1 33 131 - -
Accr12g01296 364 SUPERFAMILY Protein kinase-like (PK-like) 39 323 IPR011009 -
Accr12g01296 364 PANTHER RUST RESISTANCE KINASE LR10-RELATED 31 339 IPR045874 GO:0004672
Accr12g01296 364 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Accr12g01296 364 FunFam PR5-like receptor kinase 132 333 - -
Accr12g01296 364 Gene3D Transferase(Phosphotransferase) domain 1 132 331 - -
Accr12g01296 364 Pfam Protein tyrosine and serine/threonine kinase 58 321 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01296 Accr-Chr12 16345351 16346445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01296 9 335 Receptor kinase-like Gene Family AT1G66910 45.773 4.23e-101 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01296 PK_Tyr_Ser-Thr 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01296 - - tpra:123893290 541.576