Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01294 ATGACCCAAAATTTCAAGAATAAGTTGGGCGAAGGAGGCTTTGCTACTGTGTATAAGGGAAAGCTAAGAAGTGGACCTGACGTTGCTATCAAAATGTTAGGTAAATCCAATAAAGCTAATAATGGCCAAGATTTTATGAGTGAAGTGGCAACTATTGGGAGGATACACCATTTCAATGTGGTACATCTTGTAGGGTTCTGTGTTGAAGGAACAAAACGTGCTCTTATCTATGAATTTATGTCACGTGGATCTTTGGATAAATATATTTTTTCTAAAGAAGAAAACAAGTCCTTGAGTTATCGTAAGATATATGAGATAGCTCTAGGAGCGGCTCGTGGGATTACTTACCTCCATCATGGATGTGAGATGCAAATATTGCATTTCGATATTAAGCCTCATAACATTCTTCTTGACGAAAACTTCACTCCATAA 432 0.3727 MTQNFKNKLGEGGFATVYKGKLRSGPDVAIKMLGKSNKANNGQDFMSEVATIGRIHHFNVVHLVGFCVEGTKRALIYEFMSRGSLDKYIFSKEENKSLSYRKIYEIALGAARGITYLHHGCEMQILHFDIKPHNILLDENFTP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01294 143 Pfam Protein tyrosine and serine/threonine kinase 5 140 IPR001245 GO:0004672|GO:0006468
Accr12g01294 143 SUPERFAMILY Protein kinase-like (PK-like) 5 142 IPR011009 -
Accr12g01294 143 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 143 IPR045874 GO:0004672
Accr12g01294 143 Gene3D Transferase(Phosphotransferase) domain 1 80 143 - -
Accr12g01294 143 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Accr12g01294 143 ProSiteProfiles Protein kinase domain profile. 3 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01294 143 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Accr12g01294 143 SMART serkin_6 3 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01294 143 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01294 Accr-Chr12 16315478 16315909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01294 1 143 Receptor kinase-like Gene Family AT1G66910 53.846 7.42e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01294 PK_Tyr_Ser-Thr 2.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01294 - - aip:107619931 228.409