Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01292 ATGTTTTGCCATCAGAGATTTATATGGTTGGTGGTGGTGATGATGATGCAGGTATTGGTGCTGCTCATGAATCTGGGGAATGCTCACAACCAGTGTGTCCCGTTCCGTCTAGTTCCGGCCAAAGTTGATAGAAGCAATCCCACTACTGATGTTGATCCCTGTGCTGATTCCCTTCCTACAACTGACAATGTGGAGATGGTTGAGTTCCCAGGAGTACCAGCTCTTGAACGAGTTAGACTCGCCGTCGTATCGAAAGACTATAAGTCCCACATCTTAGAATTATGTGATCTTGGAGGTTGTCTTACTCAACTCTATCTACGATTTCATAATTCATCCATTTATCCTTTCCAGTTGGAATCATCAAACAAAACTACTTCTCGTGTTATCTTTTTCAATTGTTCCTCGATTGGGTCGAAATACTTGAAAAACGATGATTATTCTTCCTTACCTTCCGCACAAGACATCCATGTTTGCCCAATTTATGCTGTTGGCTCCAACGAAGGTGTCCTGACGAAAGACGTAGCCTTTTGCACTAAGATGTTTCAGTTGGATTCACCATTCGACCCAGATGATCTACGGTCAAACGTGTTTCGATTAAGATGGTCCCAACCCAAATGTGATGGTGAAAACAGCAAGCCAAATGTAATCAAATCTGTTTTACCACCTTCAGGTTCGATTGTGTTAGTGTTGTGCGTTGTGTTGCTTCTACTAATATATCACTACTTCAAAACAAAAGGAGATGATCATGCAAGACTTGAAAAGTTTTTGAAGGATTATGAAGCCCTCAAGCCAACAAGATTTTCATACGCTGATCTCAAAAGAATGACAAACAATTTCAAGGATAAAATAGGGGAAGGAGCTCATGGATTAGTATTCAAAGGTAAGCTGTCCAATCAGATTATAGTAGCTGTGAAGGTACTCAATAACTCTGATGATGACGATGGTAAGGACTTTATTAATGAAGTTGGGACTATGGGTAAAATTCATCACATCAATGTTGTTCGTTTGCTTGGCTTTTGTGCTGCTGACTTTTTCCGTGCTCTTATTTATGACTTTTTCCCAAATGGTTCCCTCCAAAAGTTCATATCTTCCTCCGATATCAACCAAAAATTTATTGGATGGTTGAAGTTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATTGAATATCTCCACTATGATTGCGATCGTCGAATTCTTCATTTTGACATCAATCCTTGTAATGTTTTGTTAGATGATAACTTTACTCCTAAAATTTCTGATTTTGGGTTGGCAAAATTGTGCTCTAAAACTCAAAGCGCTGTGTCAATAACAGCAGCAAGAGGAACTTTAGGTTATATTGCACCTGAAGTTTTCTCAAAAAACTTTGGAAATGTGTCATATAAGTCAGATATTTATAGTTATGGAATGTTGTTGTTAGAAATGGTTGGAGGAAGGAAAAATACCCACACAAATGAAGAAGCTTTTCAAATTTTATATCCAAAGTGGATCCATAATTTAATTGAAGGAGGAGACATAAATATTCATATTGAAGGTGAAGATGACAATAAAATCACTAGGAAACTAGCAATTGTGGGACTTTGGTGCATCCAATGGCATCCAATCGGCCGTCCATCCATGAAAACTGTGATACAAATGTTAGAAGGAGAAGGTGATGAATTAAAGATGCCCCCAATTCAAGTTGACTCCATAAATACCACGAATACAAGGATCAATAATACACCAAGACATTTGAATTTGGGGTTAGATATTATTCATGAATTAGAATAA 1770 0.3819 MFCHQRFIWLVVVMMMQVLVLLMNLGNAHNQCVPFRLVPAKVDRSNPTTDVDPCADSLPTTDNVEMVEFPGVPALERVRLAVVSKDYKSHILELCDLGGCLTQLYLRFHNSSIYPFQLESSNKTTSRVIFFNCSSIGSKYLKNDDYSSLPSAQDIHVCPIYAVGSNEGVLTKDVAFCTKMFQLDSPFDPDDLRSNVFRLRWSQPKCDGENSKPNVIKSVLPPSGSIVLVLCVVLLLLIYHYFKTKGDDHARLEKFLKDYEALKPTRFSYADLKRMTNNFKDKIGEGAHGLVFKGKLSNQIIVAVKVLNNSDDDDGKDFINEVGTMGKIHHINVVRLLGFCAADFFRALIYDFFPNGSLQKFISSSDINQKFIGWLKLQQIALGIAKGIEYLHYDCDRRILHFDINPCNVLLDDNFTPKISDFGLAKLCSKTQSAVSITAARGTLGYIAPEVFSKNFGNVSYKSDIYSYGMLLLEMVGGRKNTHTNEEAFQILYPKWIHNLIEGGDINIHIEGEDDNKITRKLAIVGLWCIQWHPIGRPSMKTVIQMLEGEGDELKMPPIQVDSINTTNTRINNTPRHLNLGLDIIHELE 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01292 589 PANTHER RUST RESISTANCE KINASE LR10-RELATED 249 563 IPR045874 GO:0004672
Accr12g01292 589 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Accr12g01292 589 Pfam Protein kinase domain 280 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01292 589 Coils Coil 585 589 - -
Accr12g01292 589 Gene3D Transferase(Phosphotransferase) domain 1 353 558 - -
Accr12g01292 589 FunFam PR5-like receptor kinase 353 558 - -
Accr12g01292 589 Gene3D Phosphorylase Kinase; domain 1 252 352 - -
Accr12g01292 589 ProSiteProfiles Protein kinase domain profile. 277 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01292 589 FunFam serine/threonine-protein kinase PBS1-like 247 352 - -
Accr12g01292 589 SUPERFAMILY Protein kinase-like (PK-like) 261 548 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01292 Accr-Chr12 16260418 16262291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01292 224 561 Receptor kinase-like Gene Family AT1G66910 46.552 1.43e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01292 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01292 - - tpra:123893290 603.979