Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01291 ATGATTTGGCATCACAGATTCTTGTTGTCGGTGATGAGCCTGCTATGGGTGCTGCTTCAGACACAAGGGAATGGTGAGGACCAGCAGGTTCATTTGCCGCCTATTCCCGATGCTCTTCAAGGACTTAATTTCTCCGTCAGTCTCATATACAATGAATCCATCTTCATATACGCGGCCTTAACAGATCCAGAAGGTTGTCTTGCCAGACTCATTCTACAACGCCGTCTCTACAATTTGTCCATTATTCATCCTTTCGAGTATGCTTATGGGACTGAAGAAGACATTGTTACTTTCTTCAATTGTTCTTCCATATATGACTCCGGATCCTGCCCCATTCTTGCTCTTGGCTCCCAGGATAGTGTCCTGCCATACTACAATAACCTTACTTTCTGCACCAATATCTCACGATTACGTTTGCCAGTACCGACACCCTATCTTCGGGGCTACAGACTTGATCTAGAATGGAAGATCCAACCAAAAATTGACCACAAAACCAGCATTATTTTATCAAGCACAGGTTCCATTGTGCTGCTTTTGCTGTTGGTTGTGTGCTTCTGCATATGCCGCTACCTCAAGCACAAAGGCGAGGATCAAGTCAGACTTGAAACGTTTTTGAAGGATTTCCAGGCACTTAAGCCTACCAGATTCTCTTATGCTGCTATTAAAAGAATCACCCACAAATTCAAGGATAAATTAGGTGAAGGTGCACATGGAACTGTCTTTAAAGGTAAGCTATCTAATGAAATTCAAGTGGCTGTCAAAGTACTCGATAATTCAGATTATGATGGAAAAGACTTCATTAATGAAATGGGGACAATGGGTAAAATTCATCACATCAATGTTGTTCGTTTATTGGGCTTTTGTGCTGATGGTTGTCGTCGAGCTCTTGTTTATGACTTCTTTTCGAATGGCTCCCTCCAAAAGTTCATCTCTTCACCAAACATCAAAGAAATTTTCCTGGGTTGGTCAAAATTGCAACAAATTGCTGTTGACATAGCAAAGGGGATTGAATATCTTCACCAAGGTTGTGATCATAGAATCCTTCATTTTGATATAAATCCTCGCAATGTGTTATTAGATAACAATTTCACTCCCAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAGATCAAAGTAATGTATCAATCACTGCAGCAAAAGGAACCTTAGGATATATTGCACCAGAAGTTTTCTCTCGAAACTTTGGAAATGTGTCGTACAAATCAGATATTTATAGTTATGGAATGCTGCTCTTAGAAATGGTTGGTGGAAGGAAAAATGTTGACACAAATCAAGTGTTGTATCCAGAATGGATCCACAATCTAATTGAAGGAGGAGATGTAAGTATCTACATAGAAGATGAAGTTGACATTGGAATTGCTAAGAAACTAGCAATTGTCGGACTTTGGTGCATTCAATGGCATTCAATAAATCGTCCATCCATAAAAACGGTGGTACAAATGCTGGAAGGAGAAGTAGATAAATTAAAAGTACCTCCAACTCCTTTTGATTTCACTACTTCAACCAATATAAACACTGTTATCCCAATAAGAAATTTGAATTTAGAGTTAGACGTGATTCATGAATTAGAATAA 1602 0.3889 MIWHHRFLLSVMSLLWVLLQTQGNGEDQQVHLPPIPDALQGLNFSVSLIYNESIFIYAALTDPEGCLARLILQRRLYNLSIIHPFEYAYGTEEDIVTFFNCSSIYDSGSCPILALGSQDSVLPYYNNLTFCTNISRLRLPVPTPYLRGYRLDLEWKIQPKIDHKTSIILSSTGSIVLLLLLVVCFCICRYLKHKGEDQVRLETFLKDFQALKPTRFSYAAIKRITHKFKDKLGEGAHGTVFKGKLSNEIQVAVKVLDNSDYDGKDFINEMGTMGKIHHINVVRLLGFCADGCRRALVYDFFSNGSLQKFISSPNIKEIFLGWSKLQQIAVDIAKGIEYLHQGCDHRILHFDINPRNVLLDNNFTPKISDFGLAKLCSKDQSNVSITAAKGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDTNQVLYPEWIHNLIEGGDVSIYIEDEVDIGIAKKLAIVGLWCIQWHSINRPSIKTVVQMLEGEVDKLKVPPTPFDFTTSTNINTVIPIRNLNLELDVIHELE 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01291 533 FunFam PR5-like receptor kinase 301 502 - -
Accr12g01291 533 ProSiteProfiles Protein kinase domain profile. 226 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01291 533 PANTHER RUST RESISTANCE KINASE LR10-RELATED 200 508 IPR045874 GO:0004672
Accr12g01291 533 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524
Accr12g01291 533 Gene3D Transferase(Phosphotransferase) domain 1 301 500 - -
Accr12g01291 533 SUPERFAMILY Protein kinase-like (PK-like) 209 492 IPR011009 -
Accr12g01291 533 Pfam Protein tyrosine and serine/threonine kinase 227 444 IPR001245 GO:0004672|GO:0006468
Accr12g01291 533 FunFam serine/threonine-protein kinase PBS1-like 195 300 - -
Accr12g01291 533 Gene3D Phosphorylase Kinase; domain 1 202 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01291 Accr-Chr12 16078251 16079930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01291 168 504 Receptor kinase-like Gene Family AT1G66910 45.042 1.21e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01291 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01291 - - tpra:123893290 556.984