Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01290 ATGAGTGTAGGAGCAATGGGAAGAGAGAAAGGATTATGGTGTTGTTTGTGTTTAGTGTTGTGGCCCTCTCTGCTTCTAATGGCGGGAGGAGATGTGAGTTCTGATGAACTTTACAACGAAACCTGTGCTTCTCAGTGTGGCATTATCACAAGCATCTCACATCCATTCCGACTACCACATGACCCACCCAACTGCGGCCTCACCGATTACGAGCTAGCCTGTGAAAACAACGTCACTCTCCTTCATTTACATCTATATAATTCTGATGATGTATTTTTGAATGGAGCATACCGGCTGGTTGGAACATACAGAGTGGTGGAAATAAACTACGACAACTTGAGAATCAAACTCGTAGATCCAGGAATTCAGGCGGGCAATTGCTCATCCCTCCCTCTCTATTCCTTATCCAAATACGACTTCAACCATTTCGTTAGTCCTTATGATTATTTTGAACATACCATTAATACTCTAAACGACACATCGACAATATCTTACCTAATCGAGAAGCAGGTGGCGTACCTGAACTGCAGCGATCCGGTGAGGGACGACACCACGTTTGTGGATACGGCTCCTTGTGTGAAAGGAGGAGGCCATCTTTATGCCGTGGCTGGTGACTTGTTGGTTCCCCAGCTTCAACCTCAATGTCGTCTGGAATTTATGACCCCCATTAGTAATCGTCTGGACGACCCAGATTGGGGAATCAAGTCCTACGCTGATATTCACAAACTCGTTTCCTTTGAATTTGAACTTTCATGGTGGCGACGATACTGTGCTGCTAATTGTTCGGCTGGCGCTTTCTGCGGTTTGAGCACTGAAGATCGAAGGCCCACTTGCTATTTACGTGGTGCGGGTGTCTGTGCAAGTCCCCTGGGAAGAGTCTATGAAACTTGTAGAGAGCTACCAAGGCTGCGCGTATTTGCAGAAGATTATCTCAAGGGAATTTTGAGAGGAATACCCCGGATATCGAGCCTAGGCGACTACTCTTACTATGATACTGGGCCATCAAAGCTTCTGATCAAATTAGGAGTGTTCACTGGAAGATTTGTTTTGCCATTCATCACATTTATCACAGTCAGATTTTTTATTGGTGTTGTACCGTTGTCTATATTGTTGATCTATACATGTCGTAGAAGACACCTGTCAACATATGAAGATATTGAAGATTTTATAAGACTTCATGACCTCATTCCAATAAGGTACTCTTATAAGGAATTGAAGACAATGACTGAAAATTTCAAGAATAAGTTGGGTGAAGGAGGCTTTGCTACTGTGTATAAGGGAAAGCTAAGGAGTGGACCTGACGTTGCTATCAAAATGTTAGGTAAATCCAATAAAGCTAATAATGGCCAAGATTTTATGAGTGAAGTGGCAACTATTGGGAGAATACACCATTTCAATGTAGTACATCTTGTAGGTTTTTGTGTTGAAGGAACAAAACGTGCCCTTATCTATGAATTTATGTCCCGTGGATCTTTGGATAAACATATTTTTTCTAAAGAATTAAACAAGTCCTTGAGTTATCATAAGATATATGAGATAGCTCTAGGAGTGGCTCGTGGGATTGCTTACCTTCATCATGGATGTGAGATGCAAATATTGCATTTCGATATCAAGCCTCATAATATTCTTCTTGACGAAAACTTCAATCCAAAAATTTCAGATTTTGGACTAGCATGTTTATATGCAGTTGATGGTAATATTGCCACTTTGACAGCGAGGGGAACAATAGGATATATAGCTCCTGAGTTGTTCTACAAGAATATTGGAAGAGTATCTCATAAGGTTGATGTTTATAGTTTTGGGATGCTTCTGATGGAAATGGCAAGTCAAAGAAGGAATTTGAATCCGCAGGCAGAACATTCAAGCCAATTATACTATCCCTTATGGATTTATGACCAATTTGATAGTAATAATGATATAGAAATGGAAGATTTGATGGAAGAAAAGGCTTTAGTAAAGAAGATGTTCATAGTAGCACTCTGGTGCATACAGCTAAAGCCTCTTGATCGTCCTTCCATGAATAAAGTAATAGAGATGTTAGAAGCAAATGATGTTTCAAGTCTTCAAATGCCCCCAAAACCCTGTCTATATCCTAATGAGAGAGTTTTAGTGGATAACATATCCAACTCTGATGAAACAACATCCATTGTTTCTCTACATTCTCATAGTAATAATGGTGAGGGAACAAGTAATGGAAATTAG 2202 0.4037 MSVGAMGREKGLWCCLCLVLWPSLLLMAGGDVSSDELYNETCASQCGIITSISHPFRLPHDPPNCGLTDYELACENNVTLLHLHLYNSDDVFLNGAYRLVGTYRVVEINYDNLRIKLVDPGIQAGNCSSLPLYSLSKYDFNHFVSPYDYFEHTINTLNDTSTISYLIEKQVAYLNCSDPVRDDTTFVDTAPCVKGGGHLYAVAGDLLVPQLQPQCRLEFMTPISNRLDDPDWGIKSYADIHKLVSFEFELSWWRRYCAANCSAGAFCGLSTEDRRPTCYLRGAGVCASPLGRVYETCRELPRLRVFAEDYLKGILRGIPRISSLGDYSYYDTGPSKLLIKLGVFTGRFVLPFITFITVRFFIGVVPLSILLIYTCRRRHLSTYEDIEDFIRLHDLIPIRYSYKELKTMTENFKNKLGEGGFATVYKGKLRSGPDVAIKMLGKSNKANNGQDFMSEVATIGRIHHFNVVHLVGFCVEGTKRALIYEFMSRGSLDKHIFSKELNKSLSYHKIYEIALGVARGIAYLHHGCEMQILHFDIKPHNILLDENFNPKISDFGLACLYAVDGNIATLTARGTIGYIAPELFYKNIGRVSHKVDVYSFGMLLMEMASQRRNLNPQAEHSSQLYYPLWIYDQFDSNNDIEMEDLMEEKALVKKMFIVALWCIQLKPLDRPSMNKVIEMLEANDVSSLQMPPKPCLYPNERVLVDNISNSDETTSIVSLHSHSNNGEGTSNGN 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01290 733 Pfam Protein kinase domain 413 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01290 733 Gene3D Transferase(Phosphotransferase) domain 1 487 691 - -
Accr12g01290 733 FunFam PR5-like receptor kinase 487 692 - -
Accr12g01290 733 FunFam serine/threonine-protein kinase PBS1-like 380 486 - -
Accr12g01290 733 ProSitePatterns Protein kinases ATP-binding region signature. 416 438 IPR017441 GO:0005524
Accr12g01290 733 SUPERFAMILY Protein kinase-like (PK-like) 395 681 IPR011009 -
Accr12g01290 733 ProSiteProfiles Protein kinase domain profile. 410 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01290 733 Gene3D Phosphorylase Kinase; domain 1 389 486 - -
Accr12g01290 733 PANTHER RUST RESISTANCE KINASE LR10-RELATED 383 706 IPR045874 GO:0004672
Accr12g01290 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Accr12g01290 733 SMART serkin_6 410 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01290 733 Pfam Wall-associated receptor kinase galacturonan-binding 42 119 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01290 Accr-Chr12 16069116 16074609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01290 364 721 Receptor kinase-like Gene Family AT4G18250 45.946 3.43e-96 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01290 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01290 - - pcin:129321062 728.783