Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01289 ATGCTTTGCCATCAGAGATTTATGTGGTTGGTGGTGTTGATGATGATGCAGGTATTGGTGCTGCTCATGAATCTGGGGAATGCTCACAAGCAGTGTGTCCCGTTCCGTCTCGTTCCGACCAAACTTGATAGAAGCAATCCCACAACTGAAGTTGATCGCTGTGCTTATTACCTTCCTAGAACTGACAATGTGGAAATGGTTGAGTTCCCAGGAGTACCAGCTCTTGAACGAGTTAGACTCGCCGTCGTATCGAAAGACTATAAGTCCCACATCTTAGAATTATGTGATCTTGGAGGTTGTCTTACTCAACTCTATCTACGATTTCATATTTCATCCATTTATCCTTTCCAATTGGAATCGTCAAAAAAAACTACTTCTAGTGTTATCTTTTTCAATTGTTCCTCGATTGGGTCGAAATACTTGAAAAACGGTCAATATTCCTTCGCTTCCGTACAAGACATGCATGTTTGCCCAATTTACGCTGTTGGCTCCAACGAAGGTATCCTGGAGAATGATGTGGCCTTTTGCACCAAGATGTTTCAGTTGGATTCACCATTCGACCCAGATGATCTACGGTCAAACGTGTTTCGATTAAGATGGTCCCAACCCAAATGTGATGGTGAAAACAGCAAGCCAAATGTATTCAAATCCGTTTTACCGCCTTCAGGTTCGATTGTGTTAGTGTTGTGCGTTGTGTTGCTTCTACTAATGTATCGCTACTACAAAACAAAAGGAGATGATCATGCAAGACTTGAAAAGTTTTTGAAGGATTATGAAGCCCTCAAGCCAACAAGATTTTCATATGCTGATCTCAAAAGAATGACAAACAATTTCAAGGATAAAATAGGGGAAGGAGCTCATGGATTAGTATTCAAAGGTAAGCTGTCCAGTCAGATTATAGTAGCTGTGAAGGTACTCAATAACTCTGATGATGATGATGGTAAGGACTTCATTAATGAAGTTGAAACTATGGGTAAAATTTATCACATCAATGTTGTTCGTTTGCTTGGCTTTTGTGCTGCCGGCTTTTTCCGTGCTCTTATTTATGACTTTTTCCCAAATGGTTCCCTCCAAAAGTTCATATCTTCCCCCGATATCAACCAAAAATTTCTTGGATGGCTGAAGTTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATTGAATATCTCCACTATGATTGCGATCGTCGAATTCTTCATTTTGACATCAATCATTGTAATGTTTTGTTAGATGATAACTTTACTCCTAAAATTTCTGATTTTGGGTTAGCGAAATTGTGCTCTAAAACTCAAAGTGTTGTGTCAATAACAGCAGCAAGAGGAACTTTGGGTTATATTGCACCTGAAGTTTTCTCAAAAAACTTTGGAAATGTGTCATACAAGTCAGATATCTATAGTTATGGAATGTTGTTGTTGGAAATGGTTGGAGGAAGGAAAAATACCCACACAAATGAAGAAGCTTTTCAAATTTTATATCCAAAGTGGATCCATAATTTAATTGAAGGAGGAGACATAAATATTCATATTGAAGGTGAAGATGACAATAAAATCGCTAGGAAACTAGCAATTGTGGGACTTTGGTGCATTCAATGGCATCCAATCAGCCGCCCATCCATGAAAACTGTGATACAAATGTTAGAAGGAGAAGGTGATGAATTAAAGATGCCCCCAATTCAAGTTGACTCCATAAATACCACGAATACAAGGATCAATAATACACCAAGATATTTGAATTTGGGGTTAGATATTATTCATGAATTAGAATAA 1767 0.3843 MLCHQRFMWLVVLMMMQVLVLLMNLGNAHKQCVPFRLVPTKLDRSNPTTEVDRCAYYLPRTDNVEMVEFPGVPALERVRLAVVSKDYKSHILELCDLGGCLTQLYLRFHISSIYPFQLESSKKTTSSVIFFNCSSIGSKYLKNGQYSFASVQDMHVCPIYAVGSNEGILENDVAFCTKMFQLDSPFDPDDLRSNVFRLRWSQPKCDGENSKPNVFKSVLPPSGSIVLVLCVVLLLLMYRYYKTKGDDHARLEKFLKDYEALKPTRFSYADLKRMTNNFKDKIGEGAHGLVFKGKLSSQIIVAVKVLNNSDDDDGKDFINEVETMGKIYHINVVRLLGFCAAGFFRALIYDFFPNGSLQKFISSPDINQKFLGWLKLQQIALGIAKGIEYLHYDCDRRILHFDINHCNVLLDDNFTPKISDFGLAKLCSKTQSVVSITAARGTLGYIAPEVFSKNFGNVSYKSDIYSYGMLLLEMVGGRKNTHTNEEAFQILYPKWIHNLIEGGDINIHIEGEDDNKIARKLAIVGLWCIQWHPISRPSMKTVIQMLEGEGDELKMPPIQVDSINTTNTRINNTPRYLNLGLDIIHELE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01289 588 Gene3D Phosphorylase Kinase; domain 1 251 351 - -
Accr12g01289 588 FunFam serine/threonine-protein kinase PBS1-like 245 351 - -
Accr12g01289 588 PANTHER RUST RESISTANCE KINASE LR10-RELATED 248 562 IPR045874 GO:0004672
Accr12g01289 588 FunFam PR5-like receptor kinase 352 557 - -
Accr12g01289 588 Gene3D Transferase(Phosphotransferase) domain 1 352 561 - -
Accr12g01289 588 SUPERFAMILY Protein kinase-like (PK-like) 260 547 IPR011009 -
Accr12g01289 588 Pfam Protein kinase domain 279 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01289 588 ProSiteProfiles Protein kinase domain profile. 276 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01289 588 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01289 Accr-Chr12 15936175 15938045 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01289 223 560 Receptor kinase-like Gene Family AT1G66910 46.839 2.77e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01289 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01289 - - tpra:123893290 601.668