Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01285 ATGCATGTTTGCCCAATTTACGCTGTTGGCTCCAACGAAGGTATCCTGGAGAATGATGTGGCCTTTTGCACCAAGATGTTTCAGTTGGATTCACCATTCGACCCAGATGATCTACGGTCAAACGTGTTTCGATTAAGATGGTCCCAACCCAAATGTGATGGTGAAAACAGCAAGCCAAATGTATTCAAATCCGTTTTACCGCCTTCAGGTTCGATTGTGTTAGTGTTGTGCGTTGTGTTGCTTCTACTAATGTATCGCTACTACAAAACAAAAGGAGATGATCATGCAAGACTTGAAAAGTTTTTGAAGGATTATGAAGCCCTCAAGCCAACAAGATTTCCATATGCTGATCTCAAAAGAATGACAAACAATTTCAAGGATAAAATAGGGGAAGGAGCTCATGGATTAGTATTCAAAGGTAAGCTGTCCAGTCAGATTATAGTAGCTGTGAAGGTACTCAATAACTCTGATGATGATGATGGTAAGGACTTCATTAATGAAGTTGAAACTATGGGTAAAATTTATCATATCAATGTTGTTCGTTTGCTTGGCTTTTGTGCTGCCGGCTTTTTCCGTGCTCTTATTTATGACTTTTTCCCAAATGGTTCCCTCCAAAAGTTCATATCTTCCCCCGATATCAACCAAAAATTTCTTGGATGGCTGAAGTTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATTGAATATCTCCACTATGATTGCGATCGTCGAATTCTTCATTTTGACATCAATCCTTGTAATGTTTTGTTAGATGATAACTTTACTCCTAAAATTTCTGATTTTGGGTTAGCGAAATTGTGCTCTAAAACTCAAAGTGTTGTGTCAATAACAGCAGCAAGAGGAACTTTGGGTTATATTGCACCTGAAGTTTTCTCAAAAAACTTTGGAAATGTGTCATACAAGTCAGATATCTATAGTTATGGAATGTTGTTGTTGGAAATGGTTGGAGGAAGGAAAAATACCCACACAAATGAAGAAGCTTTTCAAATTTTATATCCAAAGTGGATCCATAATTTAATTGAAGGAGGAGACATAAATATTCATATTGAAGGTGAAGATGACAATAAAATCGCTAGGAAACTAGCAATTGTGGGACTTTGGTGCATTCAATGGCATCCAATCAGCCGCCCATCCATGAAAACTGTGATACAAATGTTAGAAGGAGAAGGTGATGAATTAAAGATGCCCCCAATTCAAGTTGACTCCATAAATACCACGAATACAAGGATCAATAATACACCAAGACATTTGAATTTGGGGTTAGATATTATTCATGAATTAGAATAA 1308 0.3739 MHVCPIYAVGSNEGILENDVAFCTKMFQLDSPFDPDDLRSNVFRLRWSQPKCDGENSKPNVFKSVLPPSGSIVLVLCVVLLLLMYRYYKTKGDDHARLEKFLKDYEALKPTRFPYADLKRMTNNFKDKIGEGAHGLVFKGKLSSQIIVAVKVLNNSDDDDGKDFINEVETMGKIYHINVVRLLGFCAAGFFRALIYDFFPNGSLQKFISSPDINQKFLGWLKLQQIALGIAKGIEYLHYDCDRRILHFDINPCNVLLDDNFTPKISDFGLAKLCSKTQSVVSITAARGTLGYIAPEVFSKNFGNVSYKSDIYSYGMLLLEMVGGRKNTHTNEEAFQILYPKWIHNLIEGGDINIHIEGEDDNKIARKLAIVGLWCIQWHPISRPSMKTVIQMLEGEGDELKMPPIQVDSINTTNTRINNTPRHLNLGLDIIHELE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01285 435 Gene3D Phosphorylase Kinase; domain 1 98 198 - -
Accr12g01285 435 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Accr12g01285 435 FunFam serine/threonine-protein kinase PBS1-like 92 198 - -
Accr12g01285 435 SUPERFAMILY Protein kinase-like (PK-like) 107 394 IPR011009 -
Accr12g01285 435 FunFam PR5-like receptor kinase 199 404 - -
Accr12g01285 435 ProSiteProfiles Protein kinase domain profile. 123 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01285 435 Pfam Protein kinase domain 126 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01285 435 PANTHER RUST RESISTANCE KINASE LR10-RELATED 95 409 IPR045874 GO:0004672
Accr12g01285 435 Gene3D Transferase(Phosphotransferase) domain 1 199 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01285 Accr-Chr12 15719138 15720549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01285 70 407 Receptor kinase-like Gene Family AT1G66910 46.839 6.17e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr12g01285 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01285 - - tpra:123893290 555.058