Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01253 ATGATCATGACCCAGATGGTTGATGAACCTTCTCAAAGCTTCATTCCCTACCCTAGAATGACTCGCCGAGTAATCGAAGTGGAATCTCCTTCATCCTCTCAGAATATTCAGGCGTCATCCCTACATAATTCTGATGGGTTGTTCTTTTTCTTTGGAGGGATAGTAATGCTCATCATATTGCTGATTCTTGTATTTGTGTTTCGGAGTCACATTAAACCAGCAAAACTAATGAAAATGATAGCTTGGAACAAACAGCAGCCTCCGAAGGAACAGCAACAAGCAGCAGCAGAGGTGGTGGAGATGATAGCTTCAACAGCAACAAGTAAGCTGCAAGGATCCATGGAACTCCTGAGTGGGAACCTTCAAACAATTATCTACTTTGACTACTGGACATTGAAGAAGGCAACCAAGAATTTTCATTCTGGTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCGAATGGAAGGCTAATTGCAGTTAAGAAACTGTCTCTTAACAAATCCAGACAAGGCGAGAAAGAATTTCTATCAGAGGTGAGATTGATCACCAGTATTCAACACAAAAATCTGGTTCGCCTTATTGGATGCTGCACAGAAGGGATTGAAAGGATACTTGTGTATGAATACATGAGGAACAAAAGTTTGGACCTCTATATATATGGAAACAGTGGTCAATTTCTAGATTGGAGAACTAGGTTCCAGATTATTCTTGGAATAGCACGTGGATTGCAATATTTACACGAGGATTCACACAACAGAATTGTTCATCGAGATATTAAAGCAAGCAACATTCTTCTTGACGAAAAGTTTCATCCAAGGATTGGAGACTTTGGACTGGCGAGATTCTTCCCTGAAGGCGAAGATTACCTCAGCACTCAGTTTGCTGGAACATTAGGTTATACGGCTCCTGAATATGCCCTTAGAGGGGAGTTGTCAGAAAAGGCAGACATATATAGTTTTGGAGTCCTTGTACTTGAAATTATTTGTGGCAGGAAGAATACGGATATTACTTTACCATCAGACATGCAGTATCTTCCTGAATATGCCTGGAAGCTCTTTGATGAGTCAAGATTGATGGATCTTGTAGACCCAAAATTGCAGGAACTTGGGTTTACAGAAAAGGATGTTATGCAAGCAATCCATGTGGCATTCTTATGTATTCAGTCTCAAGCAAACTTAAGGCCTCCAATGTCAGAGATTGTAGCATTGTTGACATTCAAAATCGACATGGTTAGAACACCAATGAGACCATCCTTCCTCAGCCGAAGGCAGAAAAATGATGACAAGGATCTTTCTTGTGAATCCGCGTCTGAGTCATATCCTTCACCATTAGGCAGTGATTCTCTATCCATACCAAAGTAA 1380 0.4109 MIMTQMVDEPSQSFIPYPRMTRRVIEVESPSSSQNIQASSLHNSDGLFFFFGGIVMLIILLILVFVFRSHIKPAKLMKMIAWNKQQPPKEQQQAAAEVVEMIASTATSKLQGSMELLSGNLQTIIYFDYWTLKKATKNFHSGNLLGSGGFGPVYRGKLANGRLIAVKKLSLNKSRQGEKEFLSEVRLITSIQHKNLVRLIGCCTEGIERILVYEYMRNKSLDLYIYGNSGQFLDWRTRFQIILGIARGLQYLHEDSHNRIVHRDIKASNILLDEKFHPRIGDFGLARFFPEGEDYLSTQFAGTLGYTAPEYALRGELSEKADIYSFGVLVLEIICGRKNTDITLPSDMQYLPEYAWKLFDESRLMDLVDPKLQELGFTEKDVMQAIHVAFLCIQSQANLRPPMSEIVALLTFKIDMVRTPMRPSFLSRRQKNDDKDLSCESASESYPSPLGSDSLSIPK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01253 459 MobiDBLite consensus disorder prediction 441 459 - -
Accr12g01253 459 CDD STKc_IRAK 145 411 - -
Accr12g01253 459 MobiDBLite consensus disorder prediction 425 459 - -
Accr12g01253 459 ProSiteProfiles Protein kinase domain profile. 139 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01253 459 Gene3D Transferase(Phosphotransferase) domain 1 216 419 - -
Accr12g01253 459 FunFam Cysteine-rich receptor-like protein kinase 10 103 215 - -
Accr12g01253 459 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 216 420 - -
Accr12g01253 459 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 457 - -
Accr12g01253 459 SUPERFAMILY Protein kinase-like (PK-like) 120 413 IPR011009 -
Accr12g01253 459 Pfam Protein kinase domain 139 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01253 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Accr12g01253 459 SMART serkin_6 139 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01253 459 Gene3D Phosphorylase Kinase; domain 1 96 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01253 Accr-Chr12 15181338 15185415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01253 127 427 Receptor kinase-like Gene Family AT1G56120 49.169 1.76e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr12g01253 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01253 - - qsa:O6P43_022399 555.829