Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01252 ATGATCATGACCCAGATGGTTGATGAACCTTCTCAAAGCTTCATTCCCTACCCTAGAATGACTCGCCGAGTAATCGAAGTGGAATCTCCTTCATCCTCTCAGAATATTCAGGCGTCATCCCTACATAATTCTGATGGGTTGTTCTTTTTCTTTGGAGGGATAGTAATGCTCATCATATTGCTGATTCTTGTATTTGTGTTTCGGAGTCACATTAAACCAGCAAAACTAATGAAAATGATAGCTTGGAACAAACAGCAGCCTCCGAAGGAACAGCAACAAGCAGCAGAGGTGGTGGAGATGATAGCTTCAACAGCAACAAGTAAGCTGCAAGGATCCATGGAACTCCTGAGTGGGAACCTTCAAACAATTATCTACTTTGACTACTGGACATTGAAGAAGGCAACCAAGAATTTTCATTCTGGTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCGAATGGAAGGCTAATTGCAGTTAAGAAACTGTCTCTTAACAAATCCAGACAAGGCGAGAAAGAATTTCTATCAGAGGTGAGATTGATCACCAGTATTCAACACAAAAATCTGGTTCGCCTTATTGGATGCTGCACAGAAGGGATTGAAAGGATACTTGTGTATGAATACATGAGGAACAAAAGTTTGGACCTCTATATATATGGAAACAGTGGTCAATTTCTAGATTGGAGAACTAGGTTCCAGATTATTCTTGGAATAGCACGTGGATTGCAATATTTACACGAGGATTCACACAACAGAATTGTTCATCGAGATATTAAAGCAAGCAACATTCTTCTTGACGAAAAGTTTCATCCAAGGATTGGAGACTTTGGACTGGCGAGATTCTTCCCTGAAGGCGAAGATTACCTCAGCACTCAGTTTGCTGGAACATTAGGTTATACGGCTCCTGAATATGCCCTTAGAGGGGAGTTGTCAGAAAAGGCAGACATATATAGTTTTGGAGTCCTTGTACTTGAAATTATTTGTGGCAGGAAGAATACGGATATTACTTTACCATCAGACATGCAGTATCTTCCTGAATATGCCTGGAAGCTCTTTGATGAGTCAAGATTGATGGATCTTGTAGACCCAAAATTGCAGGAACTTGGGTTTACAGAAAAGGATGTTATGCAAGCAATCCATGTGGCATTCTTATGTATTCAGTCTCAAGCAAACTTAAGGCCTCCAATGTCAGAGATTGTAGCATTGTTGACATTCAAAATCGACATGGTTAGAACACCAATGAGACCATCCTTCCTCAGCCGAAGGCAGAAAAATGATGACAAGGATCTTTCTTGTGAATCCGCGTCTGAGTCATATCCTTCACCATTAGGCAGTGATTCTCTATCCATACCAAAGTAA 1377 0.4103 MIMTQMVDEPSQSFIPYPRMTRRVIEVESPSSSQNIQASSLHNSDGLFFFFGGIVMLIILLILVFVFRSHIKPAKLMKMIAWNKQQPPKEQQQAAEVVEMIASTATSKLQGSMELLSGNLQTIIYFDYWTLKKATKNFHSGNLLGSGGFGPVYRGKLANGRLIAVKKLSLNKSRQGEKEFLSEVRLITSIQHKNLVRLIGCCTEGIERILVYEYMRNKSLDLYIYGNSGQFLDWRTRFQIILGIARGLQYLHEDSHNRIVHRDIKASNILLDEKFHPRIGDFGLARFFPEGEDYLSTQFAGTLGYTAPEYALRGELSEKADIYSFGVLVLEIICGRKNTDITLPSDMQYLPEYAWKLFDESRLMDLVDPKLQELGFTEKDVMQAIHVAFLCIQSQANLRPPMSEIVALLTFKIDMVRTPMRPSFLSRRQKNDDKDLSCESASESYPSPLGSDSLSIPK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01252 458 MobiDBLite consensus disorder prediction 424 458 - -
Accr12g01252 458 Gene3D Transferase(Phosphotransferase) domain 1 215 418 - -
Accr12g01252 458 Pfam Protein kinase domain 138 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01252 458 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 215 419 - -
Accr12g01252 458 Gene3D Phosphorylase Kinase; domain 1 95 214 - -
Accr12g01252 458 FunFam Cysteine-rich receptor-like protein kinase 10 102 214 - -
Accr12g01252 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Accr12g01252 458 SUPERFAMILY Protein kinase-like (PK-like) 119 412 IPR011009 -
Accr12g01252 458 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 456 - -
Accr12g01252 458 MobiDBLite consensus disorder prediction 440 458 - -
Accr12g01252 458 CDD STKc_IRAK 144 410 - -
Accr12g01252 458 ProSiteProfiles Protein kinase domain profile. 138 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01252 458 SMART serkin_6 138 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01252 Accr-Chr12 15181338 15185415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01252 126 426 Receptor kinase-like Gene Family AT1G56120 49.169 1.57e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr12g01252 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01252 - - gmx:100791042 560.066