Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01200 ATGGCTGCCGACGGAAAGGAGAATGTAGTGAAGAAGTTGCAGAAAAGCTACTTCGATGTTCTTGGACTATGCTGTTCTTCAGAGGTACCTCTCATCGAGAACATCCTGAAATCTCTCGACGGAATCAAGGAGTACTCCGTCATCGTGCCGTCCAGAACCCTCATCGTCGTCCATGATAGTCTCGTAATCTCACAAGCTCAAATCGTGAAGGCACTGAATCAGGCAAGATTTGAAGCAAACATCAGATCAGTGAGAGAGAAGGTGGAGAGGAGAATGCCAAGTCCATTTGCAATTGCATGTGGAATATTGCTTTTGCTTTCCTTTCTCAAGTATGTGTATCGTCCTTTGCAATATCTGGCCCTCGTTGCAGTTGCTGCTGGTATATACCCCATTGTTTTGAAAGCCATAGCCTCCATTCGCAACCTTCGGATTGACATCAACATTCTCATGCTCACTGCAGTTATTGGGACGATTGCTATGAACGATTATTTGGAAGCTGGCACCATAGTGTTTTTATCTTCAATCGCAGAGTGGCTACAATCAAGCGCAAGCCACAGGTCGAGCGCAGCGATGTCGTCGCTGACGAATATAGCCCCTCAAAAAGCAGTGATAGCAGAAACCGGAGAAGCGGTCGACACCGATGAGGTGAAAGTGAACACCATTATAGCTGTTAAAGCAGGCGAAGTGATACCCATTGATGGGATTGTTGTAGAAGGCAGCTGCGAAGTTGATGAGAAGACATTGACTGGGGAGTCATACCCTGTACTCAAACAGAAGGACTCTTATGTGTGGACTGGTACAATCAACTTAAATGGTTACATTGATGTGAAGACTACTGCACTTTCGGAGGATAGTGTGGTGGCCAAAATGGCGAAGCTTGTAGAAGAAGCTCAAAACAGCAAAACCAGCACCCAGATATTGATAGATAAATTTGCCAAATTTTACACCCCAGCTGTTGTGGCCATATCAGCTCTTATAGCGGTGATTCCACTTGTGTTAAGAGTAAATAATGAGAGACATTGGTTTCACTTTGCCTTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTATCCTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTAAATCTGGTCTTCTCATCAAAGGGGGTGATTGTCTTGAAACCCTCGCAAAAATTAAGGTGATGGCTTTTGACAAAACGGGTACTATCACAAAGGGGGAATTTTTGGTGTCAAATTTCCAGTCTCTTTGTGATGACATCGAAATGAACACATTACTAAAATGGGTCACAAGCATTGAAAGCAAGTCAAGCCATCCGATTGCAGCAGCAATTGTGGACTATGGAAGGTCACTCTGCATTGCACCAAACCCCGAAAAGGTGACTGAATTTGAAAATTTTCCTGGAGAGGGTGTTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATAGAAAAATTGTCACTAGAGTTGGGTCTGAAACAGTTCCTGCCTTACAAGGTGACATTCTGGTTGGCAAAACTACTGCCTACATCTACTCTGGAGCAACGCCTATTGGATTTTTCTCTGTGACCGATGCTTGCCGATCTGGTGCCCGGGAGGCAATAGGGAAGCTGAAGTCATTGAGCATCAAAACCTCAATGCTCACAGGAGATAGTCAAGCAGCTGCCATGCAAGCACATGACCAGCTAGAGCATGTTCTGGAGATAGTCCATGCAGAACTTCTACCTGAAGACAAAGCAAAAATCATCAAAGAATTCAAGAAGGAAGGACCAACAGCCATGGTTGGAGATGGCATAAACGACGCACCTGCACTGGCTTTAGCGGATATTGGCATCTCAATGGGGATTTCAGGTTCTGCACTAGCAAGTGAGACAGGCAATATTATTCTTATGTCAAATGATCTGAGGAAGATACCTCAAGCCATTAAGCTTGCTAGAAAATCTCACAGGAAAGTAATAGAAAACATCATCTTGTCAGTAGTTACTAAAGCCGCAATTATTGGGTTGGCCATATGGGGTCATCCACTTGTCTGGGCCGCAGTTCTTGCCGATGTAGGAACATGCGTGTTGGTGATCTTAAACAGCATGCTACTTTTGAATGGCTCATCCAAGCATAAAAGAAAATGCTGGAGACCTTCCTCCGGACTTCACATCCATAAACATGGATGCAAGGCACCTAATGACAAGTTCCCTCATCATCATCATCGTCATCATCATCATCATCATGAACATAAACATCAGCATCAGAACGATCACCATTGTTGCTCAGACAAGAAGAAAGTGATCTCTCAACCTCATAAATGTGCCTCCCTGATTACTGTCTCGAAGTGCCAGTCTAGCCCTGCAATTTCAGGCTTGTGTGGGCATGCCATGCATGGTAATATCATGGATAGTCATGCTCAATGTAAAGTCAACGATGAGTTCCATGAACCCAAACATTGCCATCAAGGAAGCTGTGACAAGAATCAAGATGGAGTCCATTTGCACGATGCGAAAAGTCTAAGTTCTCTGGGTTCGCACAATTTGGATCTGCCTGCAGAAGAGAAGCACACAACTGCATTAAACAGCATTGGTACTTGTTCGGAATACAGCATGTCCCATGAAACAGTACACTGCCATAATGGAAACTGTGACATGGGAACTCATGGTAGACCAACGCCCATTTCTCCTTGCCATCTCAATTCTTCTGCTTCAAAAGATTGCCAGAAATTTGGTAGTAAGCATTGCCACTTGATCTCTGGTTGTGAAAATACAAAATGTCAATCTACTGCGCGTCAAAACCCAGAGTCTCACTCTGAACCTGCCCAAAAGCACCAGGAAGATCACGTATGTGTTGACATTGGCGATGAGTTTTCGAAAGAGAAAGAAACAGGGTGCTGTCACAAGGGCTCTACGGAAGAATTTGAAACATCCACAGTCGTGTGCGCTTGTGAGAGTTCAAAAGACAGAAAAGTTGGTGCATGTTGCATAGGCGAGATTAACTCTTCAAAGAAATCCACAGATTTCACAGTTGTGCATGCTTGTGCGAGTCTAGACAAGAGAGAGAGTGGTTCATGTTGTAAGAGCCACAACATGAAGGAATGCTGTGGCAAGTCTGAACATTTACATGCTGGTTTTGTAGGAGGGTTATCAGATATTATCATTGAATAG 3150 0.4397 MAADGKENVVKKLQKSYFDVLGLCCSSEVPLIENILKSLDGIKEYSVIVPSRTLIVVHDSLVISQAQIVKALNQARFEANIRSVREKVERRMPSPFAIACGILLLLSFLKYVYRPLQYLALVAVAAGIYPIVLKAIASIRNLRIDINILMLTAVIGTIAMNDYLEAGTIVFLSSIAEWLQSSASHRSSAAMSSLTNIAPQKAVIAETGEAVDTDEVKVNTIIAVKAGEVIPIDGIVVEGSCEVDEKTLTGESYPVLKQKDSYVWTGTINLNGYIDVKTTALSEDSVVAKMAKLVEEAQNSKTSTQILIDKFAKFYTPAVVAISALIAVIPLVLRVNNERHWFHFALVVLVSACPCALILSTPVATFCAYTKAAKSGLLIKGGDCLETLAKIKVMAFDKTGTITKGEFLVSNFQSLCDDIEMNTLLKWVTSIESKSSHPIAAAIVDYGRSLCIAPNPEKVTEFENFPGEGVHGKIDGRDIYIGNRKIVTRVGSETVPALQGDILVGKTTAYIYSGATPIGFFSVTDACRSGAREAIGKLKSLSIKTSMLTGDSQAAAMQAHDQLEHVLEIVHAELLPEDKAKIIKEFKKEGPTAMVGDGINDAPALALADIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARKSHRKVIENIILSVVTKAAIIGLAIWGHPLVWAAVLADVGTCVLVILNSMLLLNGSSKHKRKCWRPSSGLHIHKHGCKAPNDKFPHHHHRHHHHHHEHKHQHQNDHHCCSDKKKVISQPHKCASLITVSKCQSSPAISGLCGHAMHGNIMDSHAQCKVNDEFHEPKHCHQGSCDKNQDGVHLHDAKSLSSLGSHNLDLPAEEKHTTALNSIGTCSEYSMSHETVHCHNGNCDMGTHGRPTPISPCHLNSSASKDCQKFGSKHCHLISGCENTKCQSTARQNPESHSEPAQKHQEDHVCVDIGDEFSKEKETGCCHKGSTEEFETSTVVCACESSKDRKVGACCIGEINSSKKSTDFTVVHACASLDKRESGSCCKSHNMKECCGKSEHLHAGFVGGLSDIIIE 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01200 1049 FunFam Putative cadmium/zinc-transporting ATPase 3 406 527 - -
Accr12g01200 1049 NCBIfam heavy metal translocating P-type ATPase 146 698 IPR027256 GO:0006812|GO:0016020|GO:0019829
Accr12g01200 1049 Gene3D - 386 646 IPR023214 -
Accr12g01200 1049 Gene3D - 406 527 IPR023299 GO:0000166
Accr12g01200 1049 Gene3D - 184 298 - -
Accr12g01200 1049 CDD P-type_ATPase_HM 96 697 - -
Accr12g01200 1049 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Accr12g01200 1049 SFLD p-type atpase 378 647 IPR044492 -
Accr12g01200 1049 SUPERFAMILY Calcium ATPase, transduction domain A 209 294 IPR008250 -
Accr12g01200 1049 PRINTS P-type cation-transporting ATPase superfamily signature 595 614 - -
Accr12g01200 1049 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Accr12g01200 1049 PRINTS P-type cation-transporting ATPase superfamily signature 244 258 - -
Accr12g01200 1049 PRINTS P-type cation-transporting ATPase superfamily signature 541 551 - -
Accr12g01200 1049 PRINTS P-type cation-transporting ATPase superfamily signature 619 631 - -
Accr12g01200 1049 ProSitePatterns E1-E2 ATPases phosphorylation site. 397 403 IPR018303 -
Accr12g01200 1049 MobiDBLite consensus disorder prediction 729 748 - -
Accr12g01200 1049 PRINTS H+-transporting ATPase (proton pump) signature 568 584 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01200 1049 PRINTS H+-transporting ATPase (proton pump) signature 595 611 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01200 1049 PRINTS H+-transporting ATPase (proton pump) signature 627 652 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01200 1049 Pfam E1-E2 ATPase 205 374 - -
Accr12g01200 1049 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 490 IPR023298 -
Accr12g01200 1049 FunFam Copper-transporting ATPase 1, putative 184 298 - -
Accr12g01200 1049 SFLD Haloacid Dehalogenase 378 647 - -
Accr12g01200 1049 SUPERFAMILY HAD-like 394 696 IPR036412 -
Accr12g01200 1049 SUPERFAMILY HMA, heavy metal-associated domain 11 83 IPR036163 GO:0046872
Accr12g01200 1049 Gene3D - 9 83 - -
Accr12g01200 1049 NCBIfam HAD-IC family P-type ATPase 169 674 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr12g01200 1049 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 10 700 - -
Accr12g01200 1049 FunFam Putative cadmium/zinc-transporting ATPase 3 10 83 - -
Accr12g01200 1049 NCBIfam cadmium family heavy metal-translocating P-type ATPase 146 490 - -
Accr12g01200 1049 Pfam haloacid dehalogenase-like hydrolase 391 609 - -
Accr12g01200 1049 MobiDBLite consensus disorder prediction 729 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01200 Accr-Chr12 13816486 13825167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01200 11 714 Primary Pumps ATPases AT4G30110 66.997 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01200 K01534 - gmx:100817567 1293.49