Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01178 ATGGCATTGACTCTGGAAAGGTTTCCGAAAGATTTGGAAAGAGAGAACCCAACTAAGTTCACATCACTTGACCTAAAGCTAGCAACAAACAATTATGCCAACAAGTCGGAGTCAGGAAGTTATGGATCAGTTTATAACGGAACATTCAGTCATGGAATTGTTGTTGCAGTCAAGGTTCTACATGGTGACATTGGCATTTCTAACAAGAGAATGGAGGAGCGATTCATGACTGAAGTCGGCAAAATAGGAAAAGTTCATCCTTTCAATCTTGTTCGCCTCCTTGGATTCCGCCTTGAAAAGGATACAACAGCTCTAATTTATGAGTACATGAGCAATAGCTCTATCGATATGTGA 354 0.404 MALTLERFPKDLERENPTKFTSLDLKLATNNYANKSESGSYGSVYNGTFSHGIVVAVKVLHGDIGISNKRMEERFMTEVGKIGKVHPFNLVRLLGFRLEKDTTALIYEYMSNSSIDM 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01178 117 SUPERFAMILY Protein kinase-like (PK-like) 15 115 IPR011009 -
Accr12g01178 117 ProSiteProfiles Protein kinase domain profile. 30 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01178 117 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 116 - -
Accr12g01178 117 Pfam Protein tyrosine and serine/threonine kinase 38 115 IPR001245 GO:0004672|GO:0006468
Accr12g01178 117 Gene3D Phosphorylase Kinase; domain 1 5 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01178 Accr-Chr12 13383061 13383414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01178 25 116 Receptor kinase-like Gene Family AT4G23160 45.745 1.26e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Accr12g01178 PK_Tyr_Ser-Thr 1.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01178 - - cill:122316507 133.65