Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01175 ATGAGTTTTGTGTTTTCTCCACCGTCGTTTCATAGTTCTTCATTTGATGATTCTCAGACACAAGCCCAAGATACGTTCAATAAATTCAGTGACAATGTTAATTCTACGATGAAATGGGCAGTGGCTGAGTCTATTGTTTATGGGGTGGTGGTGATAATAGCCATTATAGCAATAGTATACGCCATTGTTGAGTGCTTGAAGAAAGCAGGATCAGCAATTCCAGCTTACACCCAGATTCCAACCACAGAAAAAAGCCATAAACCTTCAGATTCACATCCTTCAAACAACAAAGAAATTATATTAGCAATGCCACCAGATTCACAAGAAGTTGAGTTTGCAACTATGGAAAGATTCCTCAACAACATCAACCAAGAGAAACCCATCAGATTCTCGCCTGAGGAACTTGAACAAATCACAAACAACTACACCACTGTTTTGGGTTCTGGTGCTTTTGGGGTGGTTTATGAAGGTGAATTGTCAAATGGACAACAAGTTGCAGTGAAAGTTCTCAACAGTATGGATCTGGGTACAGAAGAACAATTCAAGGCAGAAGTTAGCACTATTGGAAGAACTTACCATATTAATTTAGTTATGCTTTATGGCTTCTGCTTCCACCGCGACAAGCGAGCTCTTGTATACGAGTTTGTCCACAATGGATCTCTCAACAATTTATTATTTGGCAGTCTTAACAGAGAAGTTGAGTTTGGGAAACTTCATGAGATTGCCATTGGAACAGCTAAAGGAATCGCTTACTTACACGAAGAGTGTCAACATAGGATCATTCACTACGACATAAAACCAGAGAATATACTTCTTGGCTTGAACTTAGAACCAAAAGTAGCAGACTTTGGTCTTGCAAAACTCTCCAACAGAGAAAGCAGCCAAGTGCATATGTCACACTTTAGAGGAACAAGAGGGTATGCTGCACCAGAATTGTGGAATCTTAATCATGCGAATCATAAGTGTGATGTTTATAGTTTTGGTATTGTTCTGTTTGAAATTGTGGGGAGGAGAAGGCATTTTGATAGTGGTTACAGTGAATCACAACAATGGCTTCCAAAATGGACTTGGGATATGTATGAGAATAATGAATTAGCAGTGATGCTTTCTCTGTGTGGGATTGAAGAGAAAGACAGGGAAAAAGCTAAGAGAATGTTAATGGTGGCTCTTTGGTGCGTTCAATATTTGGCTTCTGATAGGCCTCTTATGAGTAATGTGGTGAAGATGTTAGAGGGTGGTATGGAAATCCGTACACCACAATTTCCCTTTCAGAATTTGGTGTCTTTTAAACCACCTTTGACTTCACAGGGAACCAATAATGAAGATTCTGATGCTTCTTCTTCACGGGTGACAGAATCTTCTGGACAATCTGATTCTAAACCTTCCAACAACATATTCCATATAGAAAAATCTGCATAG 1419 0.3932 MSFVFSPPSFHSSSFDDSQTQAQDTFNKFSDNVNSTMKWAVAESIVYGVVVIIAIIAIVYAIVECLKKAGSAIPAYTQIPTTEKSHKPSDSHPSNNKEIILAMPPDSQEVEFATMERFLNNINQEKPIRFSPEELEQITNNYTTVLGSGAFGVVYEGELSNGQQVAVKVLNSMDLGTEEQFKAEVSTIGRTYHINLVMLYGFCFHRDKRALVYEFVHNGSLNNLLFGSLNREVEFGKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENILLGLNLEPKVADFGLAKLSNRESSQVHMSHFRGTRGYAAPELWNLNHANHKCDVYSFGIVLFEIVGRRRHFDSGYSESQQWLPKWTWDMYENNELAVMLSLCGIEEKDREKAKRMLMVALWCVQYLASDRPLMSNVVKMLEGGMEIRTPQFPFQNLVSFKPPLTSQGTNNEDSDASSSRVTESSGQSDSKPSNNIFHIEKSA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01175 472 FunFam Putative receptor-like protein kinase 216 418 - -
Accr12g01175 472 MobiDBLite consensus disorder prediction 432 472 - -
Accr12g01175 472 Pfam Protein kinase domain 144 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01175 472 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 25 420 - -
Accr12g01175 472 Gene3D Phosphorylase Kinase; domain 1 106 215 - -
Accr12g01175 472 SMART serkin_6 140 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01175 472 ProSiteProfiles Protein kinase domain profile. 140 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01175 472 SUPERFAMILY Protein kinase-like (PK-like) 122 410 IPR011009 -
Accr12g01175 472 FunFam S-receptor-like serine/threonine-protein kinase 109 215 - -
Accr12g01175 472 Gene3D Transferase(Phosphotransferase) domain 1 216 420 - -
Accr12g01175 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Accr12g01175 472 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01175 Accr-Chr12 13339037 13341130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01175 129 448 Receptor kinase-like Gene Family AT5G38280 40.979 6.87e-81 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Accr12g01175 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01175 - - pcin:129320890 745.732