Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr12g01174 | ATGAAGTATATCCGAAGCAGCAGCCTCAAGAGGCTCTTCTCCTGGAAACGCCGCAGTTTCGATGAGCAAGTTCTCACCAACGATGAAAACGTTGACACCTTTGAGGTTCTTCCACCCCCAGAACAGCCTCCTCAAAGACCCACTTGGAAATGCTTCTCCCACGAAGAACTCTTCGATGCCACCAATGGCTTCAGCTCAGAGAATTTGGTCGGAAAAGGAGGTTGCGCGCAGGTTTACAAGGGGACATTGAAAGATGGGTACGAGATTGCGGTGAAGAGGCTCACAAGAACTTCGAGCGATGAGAGGAAAGAGAAGGAGTTTTTGACAGAGATTGGCACAATTGGTCATGTTAATCATCCAAATGTGTTGCCTCTTCTGGGTTGTTGTATTGAAAAGGGGCTTTACCTTGTCTTTGAGCTTTCATCCAAAGGTTCTGTTGCCTCTCTTCTTCATGATCAAAACTTGCTTCCCATGGACTGGAAAACAAGACATAAGATAGTTCTTGGGACCGCTCGTGGCCTCCATTACTTGCACCAAGGCTGCAAAAGAAGGATAATCCATAGAGACATCAAGGCCTCAAACATTCTATTAACGTCAGAGTTTGAACCACAGATATCTGATTTCGGGCTGGCAAAATGGCTTCCTAATCAATGGACTCATCATTCAATTGCCCCAATAGAGGGGACATTTGGGCATTTGGCACCAGAGTACTATTTACATGGAATAGTGGATGAGAAAACAGACGTGTTTGCTTATGGGGTTTTCTTGCTTGAAGTCATCTCAGGGAGGAAACCGGTGGACGGCTCTCACCAAAGCTTACACAGCTGGGCAAAACCATTATTGAACAAAGAGGAAATAGAAACGCTGGTAGATCCAAAGCTAGAAGGAGCGTACGATTCATCTCAGTTACAAAGACTTGCCTTTGCAGCTTCTCTCTGTATCCGAGCTTCTGCAACTTGGCGACCTACCATGAGCCAGGTATTGGAGGTAATGGAGGAGGTAGAAATGAACAAAGAGAAGTGGAAGATGCCAGAGGAAGAGGAAGAACAAGAAGAAGAATTCTGGGGATTTGAGGATCTGGAATGTGAATATGAAAGTTCATTCTCTCTGACTCTACCAGACTCCATTGCAAGCTCTTAA | 1140 | 0.4544 | MKYIRSSSLKRLFSWKRRSFDEQVLTNDENVDTFEVLPPPEQPPQRPTWKCFSHEELFDATNGFSSENLVGKGGCAQVYKGTLKDGYEIAVKRLTRTSSDERKEKEFLTEIGTIGHVNHPNVLPLLGCCIEKGLYLVFELSSKGSVASLLHDQNLLPMDWKTRHKIVLGTARGLHYLHQGCKRRIIHRDIKASNILLTSEFEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAYGVFLLEVISGRKPVDGSHQSLHSWAKPLLNKEEIETLVDPKLEGAYDSSQLQRLAFAASLCIRASATWRPTMSQVLEVMEEVEMNKEKWKMPEEEEEQEEEFWGFEDLECEYESSFSLTLPDSIASS | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr12g01174 | 379 | FunFam | Putative receptor-like serine/threonine-protein kinase | 34 | 140 | - | - | |
Accr12g01174 | 379 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672|GO:0006468 | |
Accr12g01174 | 379 | ProSiteProfiles | Protein kinase domain profile. | 64 | 334 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr12g01174 | 379 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 358 | - | - | |
Accr12g01174 | 379 | SMART | serkin_6 | 64 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr12g01174 | 379 | Pfam | Protein kinase domain | 66 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr12g01174 | 379 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 140 | - | - | |
Accr12g01174 | 379 | FunFam | Putative receptor-like serine/threonine-protein kinase | 142 | 356 | - | - | |
Accr12g01174 | 379 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 332 | IPR011009 | - | |
Accr12g01174 | 379 | PANTHER | OS08G0249100 PROTEIN | 41 | 360 | IPR046958 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr12g01174 | Accr-Chr12 | 13295707 | 13299749 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr12g01174 | 52 | 327 | Trihelix Transcription Factor Family | AT1G68690 | 46.667 | 3.52e-73 | 238 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Accr12g01174 | Pkinase | 3e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr12g01174 | - | - | gmx:100819499 | 577.4 |