Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01174 ATGAAGTATATCCGAAGCAGCAGCCTCAAGAGGCTCTTCTCCTGGAAACGCCGCAGTTTCGATGAGCAAGTTCTCACCAACGATGAAAACGTTGACACCTTTGAGGTTCTTCCACCCCCAGAACAGCCTCCTCAAAGACCCACTTGGAAATGCTTCTCCCACGAAGAACTCTTCGATGCCACCAATGGCTTCAGCTCAGAGAATTTGGTCGGAAAAGGAGGTTGCGCGCAGGTTTACAAGGGGACATTGAAAGATGGGTACGAGATTGCGGTGAAGAGGCTCACAAGAACTTCGAGCGATGAGAGGAAAGAGAAGGAGTTTTTGACAGAGATTGGCACAATTGGTCATGTTAATCATCCAAATGTGTTGCCTCTTCTGGGTTGTTGTATTGAAAAGGGGCTTTACCTTGTCTTTGAGCTTTCATCCAAAGGTTCTGTTGCCTCTCTTCTTCATGATCAAAACTTGCTTCCCATGGACTGGAAAACAAGACATAAGATAGTTCTTGGGACCGCTCGTGGCCTCCATTACTTGCACCAAGGCTGCAAAAGAAGGATAATCCATAGAGACATCAAGGCCTCAAACATTCTATTAACGTCAGAGTTTGAACCACAGATATCTGATTTCGGGCTGGCAAAATGGCTTCCTAATCAATGGACTCATCATTCAATTGCCCCAATAGAGGGGACATTTGGGCATTTGGCACCAGAGTACTATTTACATGGAATAGTGGATGAGAAAACAGACGTGTTTGCTTATGGGGTTTTCTTGCTTGAAGTCATCTCAGGGAGGAAACCGGTGGACGGCTCTCACCAAAGCTTACACAGCTGGGCAAAACCATTATTGAACAAAGAGGAAATAGAAACGCTGGTAGATCCAAAGCTAGAAGGAGCGTACGATTCATCTCAGTTACAAAGACTTGCCTTTGCAGCTTCTCTCTGTATCCGAGCTTCTGCAACTTGGCGACCTACCATGAGCCAGGTATTGGAGGTAATGGAGGAGGTAGAAATGAACAAAGAGAAGTGGAAGATGCCAGAGGAAGAGGAAGAACAAGAAGAAGAATTCTGGGGATTTGAGGATCTGGAATGTGAATATGAAAGTTCATTCTCTCTGACTCTACCAGACTCCATTGCAAGCTCTTAA 1140 0.4544 MKYIRSSSLKRLFSWKRRSFDEQVLTNDENVDTFEVLPPPEQPPQRPTWKCFSHEELFDATNGFSSENLVGKGGCAQVYKGTLKDGYEIAVKRLTRTSSDERKEKEFLTEIGTIGHVNHPNVLPLLGCCIEKGLYLVFELSSKGSVASLLHDQNLLPMDWKTRHKIVLGTARGLHYLHQGCKRRIIHRDIKASNILLTSEFEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAYGVFLLEVISGRKPVDGSHQSLHSWAKPLLNKEEIETLVDPKLEGAYDSSQLQRLAFAASLCIRASATWRPTMSQVLEVMEEVEMNKEKWKMPEEEEEQEEEFWGFEDLECEYESSFSLTLPDSIASS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01174 379 FunFam Putative receptor-like serine/threonine-protein kinase 34 140 - -
Accr12g01174 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Accr12g01174 379 ProSiteProfiles Protein kinase domain profile. 64 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01174 379 Gene3D Transferase(Phosphotransferase) domain 1 142 358 - -
Accr12g01174 379 SMART serkin_6 64 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01174 379 Pfam Protein kinase domain 66 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01174 379 Gene3D Phosphorylase Kinase; domain 1 40 140 - -
Accr12g01174 379 FunFam Putative receptor-like serine/threonine-protein kinase 142 356 - -
Accr12g01174 379 SUPERFAMILY Protein kinase-like (PK-like) 39 332 IPR011009 -
Accr12g01174 379 PANTHER OS08G0249100 PROTEIN 41 360 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01174 Accr-Chr12 13295707 13299749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01174 52 327 Trihelix Transcription Factor Family AT1G68690 46.667 3.52e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr12g01174 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01174 - - gmx:100819499 577.4