Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01153 ATGCATGGAGCTAATCAATTTTTTAATCCAAGCAGCATGGATGGTGGCCTTCATAGCCAGAGAAGTGGTGAGGTGCCCATGACACATTTTAACTTGCATCATCCCACACTACCTCACATTGCATCAGGGCAACACCAGCAACCTGTACCCCAGAGGTATAGTGACATAGATGCACCATGGAGTCCTGCATATTGCTCTCCTAGGCGTCATGGTCACTATGACTCTAGATCAATGGTAGAATTTCCATCTTCTCCTTCTTCTGCAGGGTATCATATGCCATTTTCAGAGCTGCCAGATAAATGCCCTGATAGAATGCCAGAAGAATATACACGGCATCAGGTAAATCACTATCCTGTGTATGACAATCAACCACAATCCAATAATGTTGTGTGGTATCCAACTGGACCTGCATCTAGTGAGAAGTTAGGTTTTCCTGGCAATATTATTCATGGACCTCATGCTGTTGATGGGAATGGTATTCGTGAGCGCTGCCAGATGAATTTTCAGAGAAATCAATCTCCTTTTGAGCACCCAAATATTAGTAATGGAATTCCTCTAGTTGCTAATCCAGATGTGAAGTTGCATCCGGTTTTGTATCCTAATGAGCCAAATTTGCTGCATCAAACAAATAGTCGGATTGAGGAAACAAGGAACCATGTTTCTGGGGCAGGAAGACTGAATGATCATTATGTTCATGATGGTCTTGGCATAAGTTTATCTCTTGGGCACGGCAGCGTGGCTTATGGACATCATTTGCCTTCAAATTACGTTCACCAAAGAGCTGGAGCTGAATTGGGGCCTGAACTTTTTCATGATCAAGCTGTGGCTACTACAGCCCATCCGCAAATTCTACCTTTGGAAGAGTGCAGTGTGCGGTATGGGAACTCACCTCCTTATGGAGTTGATAGTCATTACCCCATGGCACATGGACATGTACCTGCGCTTGCTTTTTGGAGAAATACTCCAGCCCCACTTCTTATTGGACCATCTTATGAGGCATCCAGTTCACCACGACAGTTAAATGGTGGGGTAAATGCAAGAATAAGGGGAGAGAGTAGTCCAAGAATTTACATTGGTTCCGATAGTCAAAGTCCTCGGGTTGATTCTTCACACAAAATGTCAGGTCATGATGGATTACCCATCCCAGAATTCCCTTATAATCATGCTGTGAAGTTCAATCCAAGGACTCTTGGTCAAGAAAATCAATACCCAGTTGATGTGGACACCATTCATTCCTCAGAGGACATGAATGTTGGCATTCAATTGGAACCATTGCGACTACCAAAATCACCTTTTATTATGGCTCACAACAATGAGGTTTCAAACAATGGCACTCACATATCTGAAGCAATGGGGTTGCTGAGTTTGTATGGTGAAGACAAATGGGCAGAAAATGAAGACGAGGTTGAGAACTCTAATGCTCGGAGTATATCTTTTTCAGAGCAAAACAAAATCACTGAGAATAATAGTGAAGCTGCTGCTTCTGTTGAGTCTGAAAATGCAAAATCAAAACTTCTTGAAGAATGTGGTGATGTTGCAAAACTAGTGGATGTGGATCTAACTGCTTCTGAAGATTCTAAGCGTCTAGCTACTCAATTCAGTTTCTTGCCTGAGTTGACTGCTTCAGTAAAAAAGGCTCCGTTTGAAGGAGCTCAAGAGGTGAAAGCTGGAGCTAAAGAGCACACCACTTCTCAGAGTCACAATTTATCAATCAAAGATGACACAGCAAATGATGGAGAGTTAGGGAATGCTCATGGTGATTTGGAATTGGACTTTGATAACGACAATGCGGATACTTCTAAAATTGAGCCTACAAAAGCCGATGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAACTGATGATTTGGAAGAGATCCGTGAACTAGGTTCAGGAACTTATGGAGCTGTCTATCATGGGAAATGGAAAGGTACTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGTAAGGCCCTCGGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATACTGAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGTATTGTCCGTGATGGCCCTGATGGTTCTTTAGCAACTTTGACAGAGTTCATGATTAATGGATCCCTGAAACAGTTCTTGCATAAGAAAGATAGAACTATAGATCGCCGTAAGAGGCTCATTATAGCCATGGATGCGGCATTTGGGATGGAGTATTTACATGGAAAGAACATTGTGCATTTTGATTTGAAATATGAGAATCTATTAGTCAATATGAGAGATCCGCAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAACACACTCTAGTATCTGGAGGGGTGCGGGGAACATTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAGTATGGTGTCAGAGAATATTGATGTTTATTCATTCGGGATTGTTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCGTTGTGCTTCAATAATAGGAGGAATTGTGAACAACACATTACGTCCCCAAATCCCAACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCAGCAGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGAATATGGCTGCGCAAATGAATGTGAAGTAG 2694 0.4258 MHGANQFFNPSSMDGGLHSQRSGEVPMTHFNLHHPTLPHIASGQHQQPVPQRYSDIDAPWSPAYCSPRRHGHYDSRSMVEFPSSPSSAGYHMPFSELPDKCPDRMPEEYTRHQVNHYPVYDNQPQSNNVVWYPTGPASSEKLGFPGNIIHGPHAVDGNGIRERCQMNFQRNQSPFEHPNISNGIPLVANPDVKLHPVLYPNEPNLLHQTNSRIEETRNHVSGAGRLNDHYVHDGLGISLSLGHGSVAYGHHLPSNYVHQRAGAELGPELFHDQAVATTAHPQILPLEECSVRYGNSPPYGVDSHYPMAHGHVPALAFWRNTPAPLLIGPSYEASSSPRQLNGGVNARIRGESSPRIYIGSDSQSPRVDSSHKMSGHDGLPIPEFPYNHAVKFNPRTLGQENQYPVDVDTIHSSEDMNVGIQLEPLRLPKSPFIMAHNNEVSNNGTHISEAMGLLSLYGEDKWAENEDEVENSNARSISFSEQNKITENNSEAAASVESENAKSKLLEECGDVAKLVDVDLTASEDSKRLATQFSFLPELTASVKKAPFEGAQEVKAGAKEHTTSQSHNLSIKDDTANDGELGNAHGDLELDFDNDNADTSKIEPTKADAEAIARGLQTIKTDDLEEIRELGSGTYGAVYHGKWKGTDVAIKRIKASCFAVRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATLTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKYENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSSMVSENIDVYSFGIVMWELLTGDEPYADMRCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPAERPSFSEISKKLRNMAAQMNVK 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01153 897 Gene3D Transferase(Phosphotransferase) domain 1 710 897 - -
Accr12g01153 897 SUPERFAMILY Protein kinase-like (PK-like) 616 885 IPR011009 -
Accr12g01153 897 Pfam Protein tyrosine and serine/threonine kinase 625 887 IPR001245 GO:0004672|GO:0006468
Accr12g01153 897 MobiDBLite consensus disorder prediction 355 375 - -
Accr12g01153 897 MobiDBLite consensus disorder prediction 558 572 - -
Accr12g01153 897 Gene3D Phosphorylase Kinase; domain 1 610 709 - -
Accr12g01153 897 MobiDBLite consensus disorder prediction 1 18 - -
Accr12g01153 897 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 712 897 - -
Accr12g01153 897 SMART serkin_6 624 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01153 897 CDD STKc_MAP3K-like 630 887 - -
Accr12g01153 897 ProSiteProfiles Protein kinase domain profile. 624 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01153 897 PANTHER SERINE-THREONINE PROTEIN KINASE 409 888 - -
Accr12g01153 897 MobiDBLite consensus disorder prediction 555 585 - -
Accr12g01153 897 PRINTS Tyrosine kinase catalytic domain signature 706 719 IPR001245 GO:0004672|GO:0006468
Accr12g01153 897 PRINTS Tyrosine kinase catalytic domain signature 814 836 IPR001245 GO:0004672|GO:0006468
Accr12g01153 897 PRINTS Tyrosine kinase catalytic domain signature 743 761 IPR001245 GO:0004672|GO:0006468
Accr12g01153 897 PRINTS Tyrosine kinase catalytic domain signature 858 880 IPR001245 GO:0004672|GO:0006468
Accr12g01153 897 ProSitePatterns Protein kinases ATP-binding region signature. 630 651 IPR017441 GO:0005524
Accr12g01153 897 MobiDBLite consensus disorder prediction 1 50 - -
Accr12g01153 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01153 Accr-Chr12 13099287 13103748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01153 7 897 MAP Kinase Kinase Kinase AT5G57610 49.947 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Accr12g01153 PK_Tyr_Ser-Thr 8.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01153 - - gmx:100779077 1172.92