Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01152 ATGGATAGTCCTACTGCAATTCGACCTTCTACACCTCGTTGCAATGATGATAGCCGGCAGGTTAAATTCTTATGTAGCTTTCTAGGAAATATAATGCTCCGTCCGCTTGATGGCAAGCTTCGCTATGTTGGTGGAGAGACACGAATTGTGAGTGTTCCACGAGATATTGGCTATGAGGAGTTGATGAGTAAGGTGAGGGAGCTATATGATGGGGCAGCAATGTACCAGCAACCTGATGAGGATCTGGATACCCTTGTCTCTGTTGTGAATGATGATGACGTGGTTAATATGATGGAGGAGTATGATGTTTTTTTTGTTCTCACAATCTGA 330 0.4364 MDSPTAIRPSTPRCNDDSRQVKFLCSFLGNIMLRPLDGKLRYVGGETRIVSVPRDIGYEELMSKVRELYDGAAMYQQPDEDLDTLVSVVNDDDVVNMMEEYDVFFVLTI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01152 109 SUPERFAMILY CAD & PB1 domains 37 104 - -
Accr12g01152 109 SMART PB1_new 35 106 IPR000270 GO:0005515
Accr12g01152 109 Pfam PB1 domain 36 102 IPR000270 GO:0005515
Accr12g01152 109 Gene3D - 39 105 - -
Accr12g01152 109 PANTHER OS05G0427100 PROTEIN-RELATED 11 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01152 Accr-Chr12 13098812 13099141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01152 15 102 MAP Kinase Kinase Kinase AT5G57610 82.222 2.26e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01152 - - lja:Lj4g3v2080380.2 156.762