Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01125 ATGCAAAGTTACACAGAATGCCTGTCATCAATCTTGACTGTACATAAACTACAATCTCATTATCCTAGTGAGTACGATGTTCTAAATGACCCCAACATAAAGATAGAATACCAGGGTGGTTCATTCATTAAAGGTTTGTTGGAGAAATTAAAAGTTGACAAGTCAAGGGTGAAGAACTATTCCGCCATTGAAGACTATAAGGATGCCTTAGGTAAAGGAAGTCGTAAAGGTGGTGTAGATGTCATTTTTGATGAAGTTCCCCACCTTAAGGCATTCCCCAGAGGCTCCTCCTTAACTTCACACTTTTCTACAGCCATATTGAGTGTGCGTGAGATTATGGAAATGGATGAAATTGAGCATAAATATTTTGGAAGCAGTGACAATGATGAAGATCAAAGCCTATCTAATTCATCGTCAGATAATGAAAGTTCAAGCAGCCTCACTAGTTATAGCTTTGTGTAA 462 0.381 MQSYTECLSSILTVHKLQSHYPSEYDVLNDPNIKIEYQGGSFIKGLLEKLKVDKSRVKNYSAIEDYKDALGKGSRKGGVDVIFDEVPHLKAFPRGSSLTSHFSTAILSVREIMEMDEIEHKYFGSSDNDEDQSLSNSSSDNESSSSLTSYSFV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01125 153 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 152 IPR015683 -
Accr12g01125 153 MobiDBLite consensus disorder prediction 123 153 - -
Accr12g01125 153 MobiDBLite consensus disorder prediction 128 153 - -
Accr12g01125 153 SUPERFAMILY Periplasmic binding protein-like II 3 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01125 Accr-Chr12 12495421 12496105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01125 2 153 Ion Channels AT5G11210 32.584 1.01e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01125 K05387 - pcin:129319408 151.369