Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01112 ATGGCAAACTCAAATTACCATTTCTATGGCTATAAGTACGTTGCCATGATAATTTTTTCAGTGTTGTTATTAATAACTCAGATTGGAGCAGGCGATGATGGAGGATCACTAATCATGGAAGGGAACAATAAGTTGATAGTTGGTCTTCCTAAGAAATGTGGCTCAACTGATTTTTTCTTGGATTTAAAACTGGATTCTACAAATAAGAGTAAGGTCGAGAAGGCTCAGGGATATTCCATTGATGTTTTCAATGCTACAGTAGCCTTCCTTCAGAATATTTCTGTAGAGTCTGTGGCCTTTGCAAACGAGGATGGAAGTTGTGTTGATGATTACGACGCACTCCTTGACCAGATCGCTAAAAGAAAGTACGATGCTGTGGTTGGAGATCTGACAACTGTGGTAAATCGTTCCTACTATGTAGATTTTACTTTACCGTACACAAGATCTGATGTGAAGATGCTTGTGAAGGTTCGACATGATCTGCGGTTATAG 492 0.3923 MANSNYHFYGYKYVAMIIFSVLLLITQIGAGDDGGSLIMEGNNKLIVGLPKKCGSTDFFLDLKLDSTNKSKVEKAQGYSIDVFNATVAFLQNISVESVAFANEDGSCVDDYDALLDQIAKRKYDAVVGDLTTVVNRSYYVDFTLPYTRSDVKMLVKVRHDLRL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01112 163 Gene3D - 40 163 - -
Accr12g01112 163 Pfam Ligated ion channel L-glutamate- and glycine-binding site 67 157 IPR019594 GO:0004970|GO:0016020
Accr12g01112 163 SUPERFAMILY Periplasmic binding protein-like II 21 160 - -
Accr12g01112 163 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 159 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01112 Accr-Chr12 12013210 12015046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01112 44 157 Ion Channels AT2G24710 40.000 9.73e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01112 K05387 - pcin:129302677 182.185