Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01111 ATGGCCATTCTCTGCATCCAAATGGCTCATCAAGACTTCTATGAACACTATTCTCATTACCAAACAAGACTTGATCTTCGAATCATGGATTCTGAGAAAGATGTGATCAGAGCAGCATCTGCAGCTTTCGATTTGATGAAGAATGAAAAGGTGCATGCAATTATCGAACCTTTATTTTCAGAACAAGCGAGGTTCGTAATACAACTTGGACACAAACTTCATGTTCCCATCGTCTCGTTTTCAGCCACAAGTTCATCTCTTTCTTCAACCCGAAGCAAATATTTCATAAGGACAACACAAGATGATTGCTCACAATCACAGGCTATAGCCGCCATTATTGAAGCTTACGGATGGCGCGAAATCGTCCCAATCTACGAAGACACTGAGTATGGCAGGGGTTTGATCCCATATCTCGCAGACGAATTGGAAAAAGTAAACACTCGAGTGCCTGATAGAAGAGCCATCGATCCGAATTCTGAGGAATCCGAAATCTTAGAGTAG 501 0.4212 MAILCIQMAHQDFYEHYSHYQTRLDLRIMDSEKDVIRAASAAFDLMKNEKVHAIIEPLFSEQARFVIQLGHKLHVPIVSFSATSSSLSSTRSKYFIRTTQDDCSQSQAIAAIIEAYGWREIVPIYEDTEYGRGLIPYLADELEKVNTRVPDRRAIDPNSEESEILE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01111 166 PANTHER OS06G0188250 PROTEIN 1 165 - -
Accr12g01111 166 SUPERFAMILY Periplasmic binding protein-like I 5 159 IPR028082 -
Accr12g01111 166 Pfam Receptor family ligand binding region 6 165 IPR001828 -
Accr12g01111 166 Gene3D - 101 158 - -
Accr12g01111 166 Gene3D - 5 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01111 Accr-Chr12 11880441 11881091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01111 1 164 Ion Channels AT5G27100 49.390 2.81e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01111 K05387 - qsa:O6P43_022275 186.808