Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01102 ATGGAATTCGAGGAAGGGAAAATTGTCAGATTCTTCTCGGATGGCAAAAGTCATAAGGAACATGAACCACTGTGGCGAGGAACTGAACTATCAGCGCTGGAAAAGCCGTCATCTGGATACAGTGTTTCGTCAGCTTCCTCGCTCAAGCAAGACCATGCACGAACGTGGGGGGGAAATAGATTGGTTGAAACGTTTAAAGTTGGGGGATCTAAGGCGTTTCCGGAAGACCCTGAGCCATGGCGCAATAGGATACTGGATCCATCTAGTGAGATTGTGTTGAAATGGAACCGAGTCTTTATAGTTTCGTGCTTGATGGCTCTTTTTGTAGACCCATTGTTTCTGTACTTGCCCAGCGTGAGAAAAGATGCATACTCTTCATGTGTGAGGACACACCTGAACTTACGGATTGCTGTGACCTTTCTACGGACTGTCACAGACTTTTTCTATCTATTGCACTTGATCATTAAGTTCCGGACAGCATATGTGGCACCTAGCTCGCGGGTATTTGGTCGGGGTGAACTTGTCACGGACCCAAAGAAAATTGCTAGAAGATATATCAGATCTGATTTCTTCATTGATTTTATTGCTACTCTGCCTCTTCCCCAAGTACTCATTTGGTTTATTATACCAGCAACAAGAAGCCCTCTTGCTGATCAGAATAATAATGCTCTGGCATTGATTGTTCTGCTCCAATATGTTCCAAGATTATATTTGATCTTTCCACTAAGTTCTGAAATAATTAAAGCAACTGGAGTGGTTACAAAGACTGCATGGGCAGGAGCTGCATATAATCTGCTGTTGTATATGCTGGCCAGTCATGTTTTAGGGGCAGCTTGGTATCTTCTATCACTGGACCGTTATACCTATTGTTGGAAATCTTTTTGCAAACAGGATCCTAGTCCTAAGTGCTTTCTTTATCTGGACTGTGATTCTCTTGACCTTGAGCAGCGCAAAACACGGGCAAACATTACAAGCGTGTTTAATAACTGTGATCCCAATAATGACCACTTTGATTTTGGGATATTCAAAAATGCAGTGTTAAAAAATGTGGTCTCCACAGACTTCATCTCAAAGTACTTCTATTGTTTATGGTGGGGTTTGCAGCAACTTAGTTCTTATGGGCAGAACTTGGGGACAAGCACTTTTATGGGCGAGACATCATTTTCTATTCTGATTGCCATCCTGGGTCTTGTGTTATTTTCACATTTGATTGGGAACATGCAGACATATTTGCAATCAACCACCATAAGGCTTGAGGAGTGGAGGCTCAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGCCAACTCCCTGAAGATTTGAAACGACGTGTTCGACGATTTGATCAGTGCAAGTGGCTGGCAACTCGTGGAGTTGATGAAGAAACAATTCTACGTGGATTGCCTGCTGATCTTCGCCGTGATATCCAACGCCACCTATTCTTAGATCTTGTTCGACGAGTTCCCTTCTTCTCACAGATGGATGATCAACTATTAGATGCAATGTGTGAGCGGCTGGAATCCTTTTTGAGCACTCAGGGCACCTACATTGTTCGAGAAGGCGACCCTGTGACTGAAATGCTATTTATTGTCAGAGGTAGACTGGATAGTTCTACTACAAATGGTGGTCGGAGTGGTTTCTTCAATTCAATCATATTGAGACCTGGAGATTTTTGTGGTGAGGAGCTACTTGCTTGGGCCTTGCTTCCAAAATCAACCGTGAACCTGCCTTCCTCAACCAGGACTCTTAAATCACTTACTGAGGTTGAAGCTTTCGCTCTTCGAGCTGAAGACCTCAAGTTTGTGGCGAATCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACCTTCCGGTTTTATTCCCATCATTGGAGGACTTGGGCTGCCTGCTTCATACAGGCTGCATGGCGTCGGTATAAGAAACGGATGTCTGTCAAAGATATCGCTTTTAGGGAATCCTTCACTGTGGAAGAGAATTCGGCCAATGAGAGAGAACACGGGGACGAAAGTCCTGCTTATCCAAATTCTTCTCCGGCTAAATTAAACCTTGGGGTCACGTTACTTGCCTCAAGGTTTGCTGCAAACACAAGAAGGGGGGCTCTTAAGCTTAAAGATGACCTGCCAAAACTACAAAAACCTGAGGAACCTGACTTTACTGCTGAAGCTGATGATGACTTATAA 2184 0.4418 MEFEEGKIVRFFSDGKSHKEHEPLWRGTELSALEKPSSGYSVSSASSLKQDHARTWGGNRLVETFKVGGSKAFPEDPEPWRNRILDPSSEIVLKWNRVFIVSCLMALFVDPLFLYLPSVRKDAYSSCVRTHLNLRIAVTFLRTVTDFFYLLHLIIKFRTAYVAPSSRVFGRGELVTDPKKIARRYIRSDFFIDFIATLPLPQVLIWFIIPATRSPLADQNNNALALIVLLQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSLDRYTYCWKSFCKQDPSPKCFLYLDCDSLDLEQRKTRANITSVFNNCDPNNDHFDFGIFKNAVLKNVVSTDFISKYFYCLWWGLQQLSSYGQNLGTSTFMGETSFSILIAILGLVLFSHLIGNMQTYLQSTTIRLEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFDQCKWLATRGVDEETILRGLPADLRRDIQRHLFLDLVRRVPFFSQMDDQLLDAMCERLESFLSTQGTYIVREGDPVTEMLFIVRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLAWALLPKSTVNLPSSTRTLKSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSVKDIAFRESFTVEENSANEREHGDESPAYPNSSPAKLNLGVTLLASRFAANTRRGALKLKDDLPKLQKPEEPDFTAEADDDL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01102 727 SUPERFAMILY Voltage-gated potassium channels 86 412 - -
Accr12g01102 727 FunFam Cyclic nucleotide-gated ion channel 1 417 481 - -
Accr12g01102 727 Pfam Cyclic nucleotide-binding domain 513 601 IPR000595 -
Accr12g01102 727 Gene3D - 99 414 - -
Accr12g01102 727 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 76 719 - -
Accr12g01102 727 MobiDBLite consensus disorder prediction 660 679 - -
Accr12g01102 727 SMART cnmp_10 490 621 IPR000595 -
Accr12g01102 727 FunFam Cyclic nucleotide-gated ion channel 1 488 606 - -
Accr12g01102 727 SUPERFAMILY cAMP-binding domain-like 420 612 IPR018490 -
Accr12g01102 727 MobiDBLite consensus disorder prediction 706 727 - -
Accr12g01102 727 CDD CAP_ED 490 621 IPR000595 -
Accr12g01102 727 Gene3D Helix hairpin bin 418 480 - -
Accr12g01102 727 ProSiteProfiles cAMP/cGMP binding motif profile. 490 573 IPR000595 -
Accr12g01102 727 PRINTS EAG/ELK/ERG potassium channel family signature 453 460 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01102 727 PRINTS EAG/ELK/ERG potassium channel family signature 385 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01102 727 PRINTS EAG/ELK/ERG potassium channel family signature 359 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01102 727 PRINTS EAG/ELK/ERG potassium channel family signature 153 162 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01102 727 PRINTS EAG/ELK/ERG potassium channel family signature 270 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01102 727 PRINTS EAG/ELK/ERG potassium channel family signature 403 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01102 727 Gene3D Jelly Rolls 488 608 IPR014710 -
Accr12g01102 727 Pfam Ion transport protein 95 416 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01102 Accr-Chr12 11698539 11703363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01102 1 725 Ion Channels AT4G30360 66.757 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01102 K05391 - gmx:100808425 1149.42