Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01101 ATGCTCTCAAGATCTTGCTTAGACTTGTTGAATTTGGTCTCCGTTGATGATTACGGAGCTCTGAGTCGGATGCCAAAAGACATGGCGCCCCCTGGAGTTATGTCCAATTTCGAAGTCCGTGATGATTCCGATACCGGTGCGGTTTCCGACGACGCCGTCTCCTCTGTTTCGCAAGAACGAAGAATCATCGTTGCTAATCAGTTACCGATAAAATCGTTTCGTGACAGGGAGACGAGAAAATGGAGTTTCGAATTCGATAGTGATAGTATCTATTTGCAGCTCAAAGACGGGTTTCCCTCTGACGTGGAGGTAATCTATGTGGGTTCATTGAAAGCCGACATCGTCGATCCATCGGAACAAGAAGAAGTTTCCCAAATATTACTCGAAAAGTTCCGATGCGTGCCGGCGTTTTTACCGGCCGACGTTCACAACAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCTCTGTTTCACTACATGTTACCCATGTCGCCGAGTCACGGTGCCCGCTTCGAACGATCGCAGTGGAAGGCTTACGTTTACGCCAACAAGATTTTCGCCGATAAGGTAACGGAGGTGATTAACCCAGAAGAGGATTACGTTTGGATTCAGGATTATCATCTCATGATCTTGCCTACCATATTGAGAAGACGATTTCACCGAGTCAAACTCGGATTCTTCCTTCACAGCCCATTTCCGTCCTCTGAAATCTACAGAACAATCCCAGTTCGTGACGAGATCCTCCGAGCTCTGTTAAATTGCGATTTGGTCGGTTTTCATACATTTGATTACGCGAGACATTTCTTGTCCTGTTGCAGTAGAATGCTGGGTTTGGATTATGAGTCCAAAAGGGGTTACATTGGGCTAGATTATTACGGCCGTACAGTGACGATCAAGATCTTGCCGGTGGGGATTCACATGGGTCAGCTTCAATCTTTGTTGTCTTTATCTCAAACCGGTGATAGGATTAAGGAATTAAAGAAACAATATGAGGGGAGGATTGTTATTTTGGGTGTGGACGATATGGATATATTTAAAGGTTTAAGCTTGAAGTTATTGGCAATGGGACAACTCTTGGAAGTTCATGAAGATCTTAGGGGTAAAGTTGTTTTAGTCCAGATTCTGAATCCGGCAAGAAGCAGAGGGAGAGATATCCAAGATGTTCAAAACGAAACAAATTCAATCGCCAATGAGATCAATGAGAAATTCGGCGAACCGGGATACCAGCCAATCGTGTTTGTTAATGGCCCTGTTTCGACGCAGGAGAAAGCCTCGTACTACGCCATTTCTGAATGTGTTGTGGTGAATGCTGTAAGAGATGGTATGAATTTAGTGCCTTATAAGTACACTGTTTGTAGACAGGGGATTGATGCGAATAATGATTCCGCAAGTCCGAAACGAAGTGTCATCATAGTGTCTGAGTTCATAGGTTGTTCTCCGTCGCTGAGTGGAGCAATCAGAGTGAATCCATGGAACATAGAAGACGTAGCAGAGGCCATGAATTCGGCGATTTCCATGTCAGATTCAGAGAAACAACTGCGACACGAAAAGCATTACAAGTACATAAGCTCGCATGATGTAGCCTATTGGGCAAGGAGTTTCGATCAGGATTTAGAAAGGGCTTGTAGAGAACATTACCATAAGAGATGTTGGGGTGTTGGATTTGGCTTGGGATTTAGAATTGTGGCTCTTGATCCTACGTTCAGGAAGCTCACAGCAGACAGCATTGTGTCTGCATATAGAAACGCACAGAATAGGTTGATTCTTTTAGACTATGATGGTACTATGATGCCACAGGTATCAGTAGACAAAACCCCAAGTGATGAGGTTATCTCTGTTTTGAACCTCTTATGCAGTGACCCTAAAAACATAGTGTTTATAGTTAGTGGCAGAGATAAGAATTGCCTCAGCAAATGGTTTTCTCCATGCCACAAGCTTGGCCTCTCAGCAGAACATGGCTTCTTCACCAGGTGGGGTTGTGATAGTGCTTGGGAAACATGTGGTTTAGGAATGGATTTCGAATGGAAAAAAGTTGTGGAACCAATAATGGCACATTATACAGAAGCAACAGATGGTTCTTTCATTGAAGCAAAGGAGAGTGCTATGGTATGGCACCACCAAGAAGCCGACCCTCATTTCGGATCCTTCCAAGAAAAAGAGCTTCTTGATCACCTGGAAAGCGTGCTAGCCAACGAACCAGTTGTAGTAAAAAGAGGACAACACATTGTTGAAGTAAAACCTCAGGGTGTGAGCAAGGGCGTAGTAGTGGAGAATCTAATATCAACAATGTTGAGTATGGGAAAGAGACCAGATTTTCTTCTTTGCATGGGAGATGACAGGTCGGATGAAGACATGTTTGGGAGTCTTGCTGGTTCAGTATCAGATCCATTAACCCTAAGGGCTATACCACATGTCTATGCCTGTACAGTGGGTCAGAAACCAAGCATGGCAAACTATTATCTGGAAGACACCGTTGAAGTCATCAAGTTACTCCAAGGACTAGCCTCTGCATCATAA 2523 0.4419 MLSRSCLDLLNLVSVDDYGALSRMPKDMAPPGVMSNFEVRDDSDTGAVSDDAVSSVSQERRIIVANQLPIKSFRDRETRKWSFEFDSDSIYLQLKDGFPSDVEVIYVGSLKADIVDPSEQEEVSQILLEKFRCVPAFLPADVHNKFYHGFCKHYLWPLFHYMLPMSPSHGARFERSQWKAYVYANKIFADKVTEVINPEEDYVWIQDYHLMILPTILRRRFHRVKLGFFLHSPFPSSEIYRTIPVRDEILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSLLSLSQTGDRIKELKKQYEGRIVILGVDDMDIFKGLSLKLLAMGQLLEVHEDLRGKVVLVQILNPARSRGRDIQDVQNETNSIANEINEKFGEPGYQPIVFVNGPVSTQEKASYYAISECVVVNAVRDGMNLVPYKYTVCRQGIDANNDSASPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAISMSDSEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYHKRCWGVGFGLGFRIVALDPTFRKLTADSIVSAYRNAQNRLILLDYDGTMMPQVSVDKTPSDEVISVLNLLCSDPKNIVFIVSGRDKNCLSKWFSPCHKLGLSAEHGFFTRWGCDSAWETCGLGMDFEWKKVVEPIMAHYTEATDGSFIEAKESAMVWHHQEADPHFGSFQEKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGVVVENLISTMLSMGKRPDFLLCMGDDRSDEDMFGSLAGSVSDPLTLRAIPHVYACTVGQKPSMANYYLEDTVEVIKLLQGLASAS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01101 840 Gene3D Glycogen Phosphorylase B; 314 525 - -
Accr12g01101 840 NCBIfam trehalose-phosphatase 585 836 IPR003337 GO:0003824|GO:0005992
Accr12g01101 840 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 545 - -
Accr12g01101 840 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 49 838 IPR001830 GO:0003824|GO:0005992
Accr12g01101 840 FunFam Alpha,alpha-trehalose-phosphate synthase 315 525 - -
Accr12g01101 840 Pfam Glycosyltransferase family 20 60 541 IPR001830 GO:0003824|GO:0005992
Accr12g01101 840 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 587 704 - -
Accr12g01101 840 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 313 - -
Accr12g01101 840 CDD HAD_TPP 589 831 - -
Accr12g01101 840 Gene3D - 718 840 IPR023214 -
Accr12g01101 840 Gene3D - 587 706 IPR023214 -
Accr12g01101 840 NCBIfam HAD-IIB family hydrolase 589 792 IPR006379 -
Accr12g01101 840 Pfam Trehalose-phosphatase 591 825 IPR003337 GO:0003824|GO:0005992
Accr12g01101 840 SUPERFAMILY HAD-like 588 836 IPR036412 -
Accr12g01101 840 FunFam Trehalose-6-phosphate synthase 2 671 750 - -
Accr12g01101 840 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 717 840 - -
Accr12g01101 840 CDD GT20_TPS 60 541 IPR001830 GO:0003824|GO:0005992
Accr12g01101 840 Gene3D Glycogen Phosphorylase B; 52 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01101 Accr-Chr12 11684202 11686883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01101 1 840 Trehalose Biosynthesis Gene Families AT2G18700 67.609 0.0 1193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01101 K16055 - qsa:O6P43_002917 1347.8