Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01095 ATGCGAAACACGAGTTCTGTGATGAAGAGAGAATTCCTGAGGAAATGGATGAAGGGTCTTGGAAAATGCAGGATGATGAAGAACAACAACATGAGCTTCTTGGAGAGAAAGAAAGCCATCAAGCTTTCTGCTGATTTAGCCATGGCTTCCACCCGAACCCCAGCCACACGGTGGAGCCGAGCCGTTATCGCCCAAGCCGCCTCCTCACAAGACGACGGCTACAACAAAATCCTCATCAACCACATAGTTGGCTCGAGCCCGAAAGGGAAGATCTTCAGTACGACATCGCCTTCTTCTTCCGGCCTTTGCAGAAGCAGAAGGATCTTGAAACGGCGTCATATGGTTCGTAGAGTAGTGAAGAAAATAGTGTCACCAATGGTGATGGCAAAGAGGCTGGTGAAGAAGAGAACGAGGATACTCAAAAGTCTGTTACCAGGAGGAGAATCCATGGAAGACGACGTCGTTTTGATTGAAGAAGCCCTAGATTACATACAATCTCTCAAAGCTCAAGTTGAAGTCATGCGATGTCTTGCCGCTGCCTCTCACCCCAACACAAATTCGTACAAATTCATATAA 576 0.4722 MRNTSSVMKREFLRKWMKGLGKCRMMKNNNMSFLERKKAIKLSADLAMASTRTPATRWSRAVIAQAASSQDDGYNKILINHIVGSSPKGKIFSTTSPSSSGLCRSRRILKRRHMVRRVVKKIVSPMVMAKRLVKKRTRILKSLLPGGESMEDDVVLIEEALDYIQSLKAQVEVMRCLAAASHPNTNSYKFI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01095 191 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 180 IPR044660 GO:0006355
Accr12g01095 191 CDD bHLH_AtIBH1_like 130 178 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01095 Accr-Chr12 11575677 11576252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01095 1 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.891 8.56e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01095 - - qsa:O6P43_002930 170.244