Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01094 ATGTGCGATAATTCTTTGAACAGAATGCGAAACACGAGTTCTGTGATGAAGAGAGAATTCCTGAGGAAATGGATGAAGGGTCTTGGAAAATGCAGGATGATGAAGAACAACAACATGAGCTTCTTGGAGAGAAAGAAAGCCATCAAGCTTTCTGCTGATTTAGCCATGGCTTCCACCCGAACCCCAGCCACACGGTGGAGCCGAGCCGTTATCGCCCAAGCCGCCTCCTCACAAGACGACGGCTACAACAAAATCCTCATCAACCACATAGTTGGCTCGAGCCCGAAAGGGAAGATCTTCAGTACGACATCGCCTTCTTCTTCCGGCCTTTGCAGAAGCAGAAGGATCTTGAAACGGCGTCATATGGTTCGTAGAGTAGTGAAGAAAATAGTGTCACCAATGGTGATGGCAAAGAGGCTGGTGAAGAAGAGAACGAGGATACTCAAAAGTCTGTTACCAGGAGGAGAATCCATGGAAGACGACGTCGTTTTGATTGAAGAAGCCCTAGATTACATACAATCTCTCAAAGCTCAAGTTGAAGTCATGCGATGTCTTGCCGCTGCCTCTCACCCCAACACAAATTCGTACAAATTCATATAA 600 0.4667 MCDNSLNRMRNTSSVMKREFLRKWMKGLGKCRMMKNNNMSFLERKKAIKLSADLAMASTRTPATRWSRAVIAQAASSQDDGYNKILINHIVGSSPKGKIFSTTSPSSSGLCRSRRILKRRHMVRRVVKKIVSPMVMAKRLVKKRTRILKSLLPGGESMEDDVVLIEEALDYIQSLKAQVEVMRCLAAASHPNTNSYKFI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01094 199 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 188 IPR044660 GO:0006355
Accr12g01094 199 CDD bHLH_AtIBH1_like 138 186 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01094 Accr-Chr12 11575653 11576252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01094 9 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.891 1.30e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01094 - - qsa:O6P43_002930 170.244