Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01075 ATGGGGAAACACAACAGTAACTCAAACAAGAACCGTAACCCTAAGCCACCTAATAACAGTACCAGTGTGACAGCTACCACCACAACCAAGAAACGAACCAGACGAAGTGTTCCCAGAGATACACCTCTTCAACGTAGCTCAGAATATAGAGGAGTCACTAGGCACCGATGGACAGGACGATATGAAGCTCATTTGTGGGACAAGAATTGTTGGAATGAATCGCAGAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGATGCTGCAGCACATGCTTATGATCTAGCAGCTTTAAAATACTGGGGTCAAGAAACCATTCTCAACTTTCCGTTATCAACCTATCTCAACGAGATGAAAGAGATGGAGGGTCAGTCAAGGGAAGAATATATTGGATCATTAAGAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGCAGAGTTTTTGGCAACAAGTATCTTTACCTCGGGACTTATGCTACCCAAGAAGAAGCTGCCACAGCATATGATATGGCAGCTATTGAATATCGTGGGCTTAATGCTGTCACCAATTTTGACCTAAGTCGTTACATTAAGTGGCTTAAGCCCAAAATTAATAACGGCATCGACATGATTAACAGTACTAGTAACAGTATTAAGAGTTCAATGCTTTGTGACTCTGATAATAATAATAACCCTAATTACTCAGATACTAACTTTACCGCCCCATCACCAAACCCTAATATTTATCAAGAACATGGGTTCAATAGCTTCATCACCACCCACCAGCAAGAATCTGCTTCGTTCAGTAGTGGGGATGAAACCACCGCCACCGCCAGCTATGCTCAGTCACGGCAGGCGAATGCCACATCAGCCCTAGGGCTCTTGCTTCAGTCGTCCAAGTTCAAGGAGATGATAGAGATGACGTCGGCTGCTGATTTGTCAGTTGCGACGGTCACTGCGCCTGTGAAGCCGGAGGAGTCTCGGTTGCCGGCATGCAGGTTTCCAGCGGATATTCAGACGTACTTTGAGTGTGAAGAGGACTCTAACAATGATGGATATGGAGAAGGGGATCATAATACAGTGTTCAGTGAGCTCAATAATTATTCTTTTGTTTCTCCAATGTTCGACTATCATGATGACGACTTTGAGACATGA 1143 0.4409 MGKHNSNSNKNRNPKPPNNSTSVTATTTTKKRTRRSVPRDTPLQRSSEYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEDAAAHAYDLAALKYWGQETILNFPLSTYLNEMKEMEGQSREEYIGSLRRHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPKINNGIDMINSTSNSIKSSMLCDSDNNNNPNYSDTNFTAPSPNPNIYQEHGFNSFITTHQQESASFSSGDETTATASYAQSRQANATSALGLLLQSSKFKEMIEMTSAADLSVATVTAPVKPEESRLPACRFPADIQTYFECEEDSNNDGYGEGDHNTVFSELNNYSFVSPMFDYHDDDFET 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01075 380 CDD AP2 136 190 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 Pfam AP2 domain 48 103 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 Pfam AP2 domain 135 180 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 MobiDBLite consensus disorder prediction 1 49 - -
Accr12g01075 380 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 260 - -
Accr12g01075 380 SUPERFAMILY DNA-binding domain 130 190 IPR016177 GO:0003677
Accr12g01075 380 ProSiteProfiles AP2/ERF domain profile. 129 188 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 PRINTS Ethylene responsive element binding protein signature 170 190 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 MobiDBLite consensus disorder prediction 1 31 - -
Accr12g01075 380 SMART rav1_2 136 194 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 SMART rav1_2 48 117 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 ProSiteProfiles AP2/ERF domain profile. 48 111 IPR001471 GO:0003700|GO:0006355
Accr12g01075 380 Gene3D AP2/ERF domain 48 113 IPR036955 GO:0003700|GO:0006355
Accr12g01075 380 Gene3D AP2/ERF domain 129 190 IPR036955 GO:0003700|GO:0006355
Accr12g01075 380 FunFam AP2-like ethylene-responsive transcription factor 47 113 - -
Accr12g01075 380 SUPERFAMILY DNA-binding domain 47 113 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01075 Accr-Chr12 11365210 11368666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01075 2 192 AP2-EREBP Transcription Factor Family AT5G57390 54.502 3.40e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr12g01075 AP2 3e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01075 K09285 - gmx:100804555 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01264 8 31696853 31699512 Accr12g01075 12 11365210 11368666 CCT