Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01074 ATGGGGAAACACAACAGTAACTCAAACAAGAACCGTAACCCTAAGCCACCTAATAACAGTACCAGTGTGACAGCTACCACCACAACCAAGAAACGAACCAGACGAAGTGTTCCCAGAGATACACCTCTTCAACGTAGCTCAGAATATAGAGGAGTCACTAGGCACCGATGGACAGGACGATATGAAGCTCATTTGTGGGACAAGAATTGTTGGAATGAATCGCAGAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGATGCTGCAGCACATGCTTATGATCTAGCAGCTTTAAAATACTGGGGTCAAGAAACCATTCTCAACTTTCCGTTATCAACCTATCTCAACGAGATGAAAGAGATGGAGGGTCAGTCAAGGGAAGAATATATTGGATCATTAAGAAGGAAAAGCAGTGGTTTTTCTCGGGGAGTTTCTAAATACAGAGGCGTGGCAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGCAGAGTTTTTGGCAACAAGTATCTTTACCTCGGGACTTATGCTACCCAAGAAGAAGCTGCCACAGCATATGATATGGCAGCTATTGAATATCGTGGGCTTAATGCTGTCACCAATTTTGACCTAAGTCGTTACATTAAGTGGCTTAAGCCCAAAATTAATAACGGCATCGACATGATTAACAGTACTAGTAACAGTATTAAGAGTTCAATGCTTTGTGACTCTGATAATAATAATAACCCTAATTACTCAGATACTAACTTTACCGCCCCATCACCAAACCCTAATATTTATCAAGAACATGGGTTCAATAGCTTCATCACCACCCACCAGCAAGAATCTGCTTCGTTCAGTAGTGGGGATGAAACCACCGCCACCGCCAGCTATGCTCAGTCACGGCAGGCGAATGCCACATCAGCCCTAGGGCTCTTGCTTCAGTCGTCCAAGTTCAAGGAGATGATAGAGATGACGTCGGCTGCTGATTTGTCAGTTGCGACGGTCACTGCGCCTGTGAAGCCGGAGGAGTCTCGGTTGCCGGCATGCAGGTTTCCAGCGGATATTCAGACGTACTTTGAGTGTGAAGAGGACTCTAACAATGATGGATATGGAGAAGGGGATCATAATACAGTGTTCAGTGAGCTCAATAATTATTCTTTTGTTTCTCCAATGTTCGACTATCATGATGACGACTTTGAGACATGA 1194 0.4422 MGKHNSNSNKNRNPKPPNNSTSVTATTTTKKRTRRSVPRDTPLQRSSEYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEDAAAHAYDLAALKYWGQETILNFPLSTYLNEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPKINNGIDMINSTSNSIKSSMLCDSDNNNNPNYSDTNFTAPSPNPNIYQEHGFNSFITTHQQESASFSSGDETTATASYAQSRQANATSALGLLLQSSKFKEMIEMTSAADLSVATVTAPVKPEESRLPACRFPADIQTYFECEEDSNNDGYGEGDHNTVFSELNNYSFVSPMFDYHDDDFET 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01074 397 SUPERFAMILY DNA-binding domain 47 113 IPR016177 GO:0003677
Accr12g01074 397 MobiDBLite consensus disorder prediction 1 49 - -
Accr12g01074 397 FunFam AP2-like ethylene-responsive transcription factor 146 207 - -
Accr12g01074 397 CDD AP2 146 207 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 FunFam AP2-like ethylene-responsive transcription factor 47 113 - -
Accr12g01074 397 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 MobiDBLite consensus disorder prediction 1 31 - -
Accr12g01074 397 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 SMART rav1_2 48 117 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 282 - -
Accr12g01074 397 Pfam AP2 domain 146 197 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 Pfam AP2 domain 48 103 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 Gene3D AP2/ERF domain 48 113 IPR036955 GO:0003700|GO:0006355
Accr12g01074 397 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Accr12g01074 397 ProSiteProfiles AP2/ERF domain profile. 48 111 IPR001471 GO:0003700|GO:0006355
Accr12g01074 397 SUPERFAMILY DNA-binding domain 146 207 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01074 Accr-Chr12 11365210 11368666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01074 2 209 AP2-EREBP Transcription Factor Family AT5G57390 61.137 1.65e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr12g01074 AP2 3.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01074 K09285 - gmx:100804555 458.759