Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01072 ATGTTCGGCCAGACTTCGCCCTCACTTGCTTCTATTGAGTTTTCGATCTGCTTTTGCTGGTTCGATTTGGTGTTTAAGCTTCACATTTGCTCCTCCATTTCCGCCTCTGTCGAGTGTGAGCCCCAATTTCACGATCCAGATCTCAATCTCACCATCGTCACTCTAATTTCACGATCCAGCCCTAATTGCGACGGCAAGCAACTCGAGGATGGCCGAACCTTAGCGGATTACAATATCCAGAAGGAATCCACCCTCCATTTGGTGCTCTGA 270 0.4852 MFGQTSPSLASIEFSICFCWFDLVFKLHICSSISASVECEPQFHDPDLNLTIVTLISRSSPNCDGKQLEDGRTLADYNIQKESTLHLVL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01072 89 Gene3D - 47 89 - -
Accr12g01072 89 ProSiteProfiles Ubiquitin domain profile. 64 89 IPR000626 GO:0005515
Accr12g01072 89 SUPERFAMILY Ubiquitin-like 63 89 IPR029071 -
Accr12g01072 89 Pfam Ubiquitin family 64 89 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01072 Accr-Chr12 11358670 11359039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01072 65 89 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 100.000 1.23e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01072 K02927 K08770 psom:113344338 54.299