LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr12g01047	ATGCAGCAAGGTGATCAGACGGTGATAAGCTTGAGGCCTGGTGGTGGTCGTCCCGGCGGTAGCAGGTTCCTTGCTCCTCGATTCGACTCATCCTCATCGGCTTCCTCTGCTTCTCCTGCTTTTGGTTCCTTTGCCTCTGATCCTTCTCTCCTTCGTCCCCATAGCGGTGCTCCAACTTCTTTTTCCATTAAGGCTGGAGATGCACGGTTTGAGGGTCGTGAGCGTGTGCGATACACTAGGGATCAGCTTTTACAACTGAGGGAGGTTGTTGAGATCCCTGAAGATATTTTAAAAATTAAACAAGATATAGAAACCGAACTTTTTGGTGAAGATCAAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTACAAAATCGATACTCTGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTACAGAAGATAAGTCATGGGAAAATCTGAGAGAAAATAGAGAGTTTGGAAATCGCTTTGATTCAAGGAACCAGGATTCTAATCAGTTTAATCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCACATATTTCTTCCAACCAAGGAGGACCTGCTCCAACTTTGATCAAGGCTGAAGTTCCATGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACTGTGAAAGGAATTTTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGATGTCATTTCACTTATATTTGATAAGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCTCTTCTTTGTTCAGATCTTGATGCAAAGCTCCCTCCATTCCCCTCTGATGAACCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAACAACTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGACGGAGCGTAGGGATAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAATATCCGACTAATTGGAGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGATCTGATAGCAAGTCCTGTCCAGTTGAGGAAAACGTTGAAGCCATTTGTCAATTTTTCAATACTATTGGTAAACAACTTGATGAAAACCAAAAATCACGGCGTATTAATGACATGTACTTTAGCCGATTGAAAGATCTGAGCACAAATCCCCAACTTGTATCACGGTTGAGGTTCATGGTTCGTGATGTTCTAGATTTACGTGCTAACAACTGGGTTCCAAGACGTGAGGAGGTTAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGTGCTACTGCAAGCATGAGAAATAACCGTCCTGCAGCCTCGGGTGTTCAAGGAAATATAAGCCCTGGTGGATTTCCGATTTCTCGACCTGGCACAGGAGGTTTGATGCCTGGAATGCCGGGGACCAGGAAGATGCCTGGGATGCCTGGAATGGATAATGATAACTGGGAAATACCTAGGACAAGATCAATGCCAAGAGGAGACATGTCAAGTATGCAAGCTGCAGGACGTGGCCAGTCTCCTTTACTCTCAAAGCCCTCAGCCCTGAACTCAAAGCTATTACCTCAAGGTAGTGGTCTCGTAAGTGGAAGAAGCAGTGCCCTAGTGCATGGTGGTGGTGGTGCTCCTTCTCGTCCATCAAACTTTGTTTCTGGTTCCGAGCCTGCATCTCAAATCCCTTCTTCTGTGAAAGCTGTTCCTAGTGGGTCCTTTGAGAAGCCACAGACTCCACCTCAAAAATTAAATTTTGATGAACTTCGCCGAAAAACCAGCTCTCTTCTGGAAGAATATTTCAGTGTTCGCCTTTTAGATGAGGCATTGCAGTGTGTGGTAGAACTAAAGGCTCCATCCTACCACCCTGAGTTTGTTAAGGAGGCCATTTCCCTCGCCTTAGACAAAAGTCTGCCTTGTGTTGATATTGTTGCCAATCTTCTTGAGTATCTATTTATTAAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTGTGTTGTTTGGTTCCATGCTAGACGATATCGGCATAGATTTGCCTAAAGCCCCAAATAATTTTGGTGAGATAATTGGGAAGCTAATTTTGGCTGGGGGATTGGATTTTAACGTGGTTTTAGAGATCCTTAAGAAGGTGGAAGATGACTTTTTCCAGAAAGCAATATTTGAAGCTGCAAAAAGGGTCATTAGTGATGCATCTGGGCAAGCCCTTTTAGATTCGCAAGCCTCCGATATTGAGGCTTGCCACAGTGTGCTCAAGTGA	2397	0.4476	MQQGDQTVISLRPGGGRPGGSRFLAPRFDSSSSASSASPAFGSFASDPSLLRPHSGAPTSFSIKAGDARFEGRERVRYTRDQLLQLREVVEIPEDILKIKQDIETELFGEDQSWGRAENSAQQLQNRYSEPDNRDWRGRSGQLPASTEDKSWENLRENREFGNRFDSRNQDSNQFNRQDQLNSQFARAHISSNQGGPAPTLIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLDAKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKLREEVRQMTAPEQETERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSDSKSCPVEENVEAICQFFNTIGKQLDENQKSRRINDMYFSRLKDLSTNPQLVSRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNNRPAASGVQGNISPGGFPISRPGTGGLMPGMPGTRKMPGMPGMDNDNWEIPRTRSMPRGDMSSMQAAGRGQSPLLSKPSALNSKLLPQGSGLVSGRSSALVHGGGGAPSRPSNFVSGSEPASQIPSSVKAVPSGSFEKPQTPPQKLNFDELRRKTSSLLEEYFSVRLLDEALQCVVELKAPSYHPEFVKEAISLALDKSLPCVDIVANLLEYLFIKKILTARDIGTGCVLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFNVVLEILKKVEDDFFQKAIFEAAKRVISDASGQALLDSQASDIEACHSVLK	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr12g01047	798	Gene3D	-	627	792	-	-
	Accr12g01047	798	ProSiteProfiles	MI domain profile.	633	755	IPR003891	-
	Accr12g01047	798	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	57	791	IPR045208	GO:0003743
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	26	43	-	-
	Accr12g01047	798	FunFam	Eukaryotic translation initiation factor isoform 4G-2	213	448	-	-
	Accr12g01047	798	Pfam	MA3 domain	634	746	IPR003891	-
	Accr12g01047	798	Gene3D	-	213	448	-	-
	Accr12g01047	798	SMART	ma3_7	634	746	IPR003891	-
	Accr12g01047	798	SMART	if4_15	222	447	IPR003890	GO:0003723\|GO:0005515
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	594	625	-	-
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	1	58	-	-
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	548	578	-	-
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	535	628	-	-
	Accr12g01047	798	SUPERFAMILY	ARM repeat	215	450	IPR016024	-
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	115	129	-	-
	Accr12g01047	798	SUPERFAMILY	ARM repeat	628	782	IPR016024	-
	Accr12g01047	798	Pfam	MIF4G domain	222	447	IPR003890	GO:0003723\|GO:0005515
	Accr12g01047	798	MobiDBLite	consensus disorder prediction	114	154	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr12g01047	Accr-Chr12	11042444	11047602	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr12g01047	1	796	Eukaryotic Initiation Factors Gene Family	AT5G57870	65.087	0.0	981

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr12g01047	K03260		-	qsa:O6P43_022212	1224.92