Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01037 ATGTTTGACTGTAATTACAAGTCACAGTACATGCGTAGCCAGCGGGAAAAATTTGCCAGGTTGGATCACTTGGACTCTAGGCTATCTTCATCCTCTGATGCTGGACATAATAAATGTGGATTTGGTACATTTGAATTAAGCCATGGTGGTTATGCACGCATGGGAACCACTGGATCATTCAAAAGAGGAATGACAAAGGGGTCTGAAAGGCTGAAGTCAATTGGCCGATCACTTGGATTTGGGGCATCTTGGGCAGTCTTCCCAGAAGACCTTAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAATTTTTTACTCTTGTGCAATAAGCTTTTTGTAATCTCATGCATTTTGGCTGTGTCTATTGATCCATTATTTTTTTATCTCCCTGTGATCAATGATTCAGCAAACTGTCTTGGTATAGATCGAAATATGGCAATCATAGTCAGCACTCTGAGAGCAGTCATTGATGCCTTCTACCTTATACGCATGGCTCTCCAATTTCGTACTGCTTACATAGCTCCATCATCTCGTGTCTTTGGACGAGGTGAACTTGTTATAGATCCATCACAAATTGCCAAGCGATACTTGCAGCAATATTTCATTATCGATTTGCTTTCTGTATTGCCCTTGCCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTATTGGCAACAAAGGAGGCCTTACTATTCATTATCTTACTTCAATATGTTCCTCGATTGCTCCGGATGGTACCGCTGACTTCAGAACTTAAGAGAACATCTGGTGTCTTTGCTGAAACTGCATGGGCAGGAGCTGCATATTATTTGCTATTATACATGTTAGCTAGTCATATAGTTGGAGCATTTTGGTACTTGTTAGCCATTGAGCGCAACGACTCTTGCTGGCAGAAGGCTTGTGATGAAAATGGATGTAACAAAAATTTCTTGTATTGTGGCAACCAGCACATGGAAGGTTATAGTGCCTGGCAGAATAGAAGCAGAGATATTTTCAATTCACAGTGCTCTGCTGATGGTGACAATCCACCTTTTGATTATGGAATTTTTACCCAAGCATTTTCATCCGGGATTGTTTCATCAAAAACATTCATCTCTAAATACTGCTACTGTTTATGGTGGGGGCTGCAGAATTTGAGTACACTTGGCCAAGGGCTTCAAACCAGCACCTACACTGGGGAGGTTATATTTTCAATAGCACTGGCCATTTTCGGGCTTATCCTCTTTGCACTCCTGATTGGTAACATGCAGACGTACCTTCAGTCTCTTACCATCAGGCTTGAGGAAATGAGAGTCAAAAGACGTGATTCAGAACAGTGGATGCATCATCGCTTGCTACCCCACGAGCTTAGAGAACGTGTTAGACGCTATGATCAATATAAGTGGCTGGCAACACGTGGCGTGGATGAAGAAAGTTTGGTGCAGAGTCTACCAAATGATCTCAGAAGAGATATTAAGCGTCATCTTTGTCTGGCTTTAGTGAGAAGGGTGCCACTATTTGAGAGTACGGATGAGAGATTACTTGATGCAATTTGTGAGAGACTGAAACCATGCTTATTTACAGAGAATACTTACATTGTTCGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATCCGTGGTCGCCTTGAGAGTGTTACCACGGATGGCGGGAGAAGCGGATTTTTCAACCGAACTTTCCTAAAAGAGACAGACTTCTGTGGTGAGGAGCTTTTAACATGGGCCTTGGATCCCAAGTCTGGTTCCAACCTTCCATCTTCTACTAGAACAGTTAAAACACTTGCAGAGGTTGAGGCTTTTGCATTGATTTCTGAAGACTTAAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGTAGGCAGGTTCAACATACCTTTCGCTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCTGCGTGGCGCCGTTATTGCAAGAGGAAGATTATGGAGCTTCGTCGGAAAGAAGAATGTGAAGGAGCTCACAACAATGCCAGTGGTGGTGGTTCGTACAGCATTGGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGTGGTATACATCGTAATAGGAATGCCAAGTCTGCCAGGGAATTGGTGAAACTACAGAAGCCACCAGAGCCTGACTTTACTGCAGATGAATGA 2187 0.4289 MFDCNYKSQYMRSQREKFARLDHLDSRLSSSSDAGHNKCGFGTFELSHGGYARMGTTGSFKRGMTKGSERLKSIGRSLGFGASWAVFPEDLKVSEKKIFDPQDNFLLLCNKLFVISCILAVSIDPLFFYLPVINDSANCLGIDRNMAIIVSTLRAVIDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYLQQYFIIDLLSVLPLPQIVVWRFLQRSKGSDVLATKEALLFIILLQYVPRLLRMVPLTSELKRTSGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACDENGCNKNFLYCGNQHMEGYSAWQNRSRDIFNSQCSADGDNPPFDYGIFTQAFSSGIVSSKTFISKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEESLVQSLPNDLRRDIKRHLCLALVRRVPLFESTDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKTLAEVEAFALISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKEECEGAHNNASGGGSYSIGATFLASRFAANALRGIHRNRNAKSARELVKLQKPPEPDFTADE 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01037 728 Pfam Ion transport protein 110 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr12g01037 728 SUPERFAMILY cAMP-binding domain-like 434 624 IPR018490 -
Accr12g01037 728 ProSiteProfiles cAMP/cGMP binding motif profile. 505 589 IPR000595 -
Accr12g01037 728 FunFam Cyclic nucleotide-gated ion channel 1 432 496 - -
Accr12g01037 728 Gene3D Helix hairpin bin 433 496 - -
Accr12g01037 728 SMART cnmp_10 505 636 IPR000595 -
Accr12g01037 728 SUPERFAMILY Voltage-gated potassium channels 100 427 - -
Accr12g01037 728 Gene3D - 111 430 - -
Accr12g01037 728 Gene3D Jelly Rolls 503 623 IPR014710 -
Accr12g01037 728 FunFam Cyclic nucleotide-gated ion channel 1 503 621 - -
Accr12g01037 728 PRINTS EAG/ELK/ERG potassium channel family signature 165 174 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01037 728 PRINTS EAG/ELK/ERG potassium channel family signature 418 427 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01037 728 PRINTS EAG/ELK/ERG potassium channel family signature 400 411 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01037 728 PRINTS EAG/ELK/ERG potassium channel family signature 282 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01037 728 PRINTS EAG/ELK/ERG potassium channel family signature 468 475 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g01037 728 CDD CAP_ED 505 636 IPR000595 -
Accr12g01037 728 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01037 Accr-Chr12 10897937 10902563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01037 1 728 Ion Channels AT2G23980 74.533 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01037 K05391 - gmx:100820202 1211.44