Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01031 ATGCCCGAGCACCGTCACGCTCTCCGGCCTCCGCCGATTCGAACCCTCGATCGTCCTGTTGAACGAGGGGATAAACGACAAGGTCGTGATAAAAGTGAAGGACAATATGATGACGATGATGATGATGACGACGATGAGAAGACGAACCGGAAACGAGTCTGTAAAGAACCGTCTAGCGAGTTACGGAATTGTAAACCTCCGGTTGAGGAGGCAGAGCCGCAAGAATCTACTTCAGAAACCCTAGTTATGTCCTCTTCGGTTGAATCGGCGATGGCTAGTAAGAGTGCTGACTTACCGGCCAGCTCTGCTACGCCGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGGACCTTCAAAAATGGAAACTAGTGTGAGAGAAACAGTCCAGGAAGCTAAGAATCAGACAGAAGATCGACTTGCATTGTCTATATGCCCAACTCCATTGTCTGCAGTATCACCATCTTCTGCTACACAACCTTTATCATCTATTCCTAGTTCAACTCTACCAGAACAGAGACTATCTCCTCTGAACGTTAGTAATGGACATGTGCTGGGAGCAGGCAAGAAAATTTTTTCTGGCGGTAAAGGTTTTTCTGCTGTCAATGTTGCGAGGGCATCTGCATCTGATGGATACAACTGGCGCAAGTATGGTCAGAAGCAGGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTACTGCAAAGAAGATTGAATTTTGTGATCATTCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAGCCACGAGCCACTACGGAAGACTAACCCTAACACCACTGGTGAAATTAAGTTCCTGCCATCTAATGAACCTACTGCTGAAGCCAATCTTCCAGAACAGCTCATTGGAGTGCCCAAGGATGCAGATCCAACCTCTTCTAAAAAAGAACCTCTACAAGATTTACCGTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAATTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAACAAGAGTGAAGAATGGTGACTTAACGAACTTGGACTCGCATGTAGAACCTGGAAAGAATTCTAAGTATGTTTTGCATGCAGCAGGGGATGTTGGAATATCAAGTGATGGTTACCGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCCCATCCCAGAAATTACTACCGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTCGATGATCCTGGTGCTGTCATCATTACATATAAAGGAGCACACAACCATGACAAGCCTGTGTCCAAGAAACGACATGGCCCACCAAGTGCTTCTCCTGGCGCTGCAACTGCCCCTGCCTCGTCAAACAATTTGCAAGGCACGCTTACTGATTCACAGCGAAACCAAGAAAATTCTGCTCAGTGGTCGGTGGACTCTGAAGAAGAATTAACTGAAGACGCCTCTGACCTTGGGGGTGAGAAAGCAATCGAGTCGGCTCGAACTCTCTTAAGCATGGGTGAAATTAAGCCTTGCTGA 1566 0.4604 MPEHRHALRPPPIRTLDRPVERGDKRQGRDKSEGQYDDDDDDDDDEKTNRKRVCKEPSSELRNCKPPVEEAEPQESTSETLVMSSSVESAMASKSADLPASSATPIDGRDESKEPNGPSKMETSVRETVQEAKNQTEDRLALSICPTPLSAVSPSSATQPLSSIPSSTLPEQRLSPLNVSNGHVLGAGKKIFSGGKGFSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCTAKKIEFCDHSGHMIEIIYKGQHSHEPLRKTNPNTTGEIKFLPSNEPTAEANLPEQLIGVPKDADPTSSKKEPLQDLPCSADKKRQNSSGLSENGKFILKVEHVDEPELKTRVKNGDLTNLDSHVEPGKNSKYVLHAAGDVGISSDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQIETAVDDPGAVIITYKGAHNHDKPVSKKRHGPPSASPGAATAPASSNNLQGTLTDSQRNQENSAQWSVDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01031 521 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 473 IPR044810 GO:0003700
Accr12g01031 521 ProSiteProfiles WRKY domain profile. 203 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 MobiDBLite consensus disorder prediction 118 140 - -
Accr12g01031 521 MobiDBLite consensus disorder prediction 1 34 - -
Accr12g01031 521 MobiDBLite consensus disorder prediction 1 140 - -
Accr12g01031 521 MobiDBLite consensus disorder prediction 436 504 - -
Accr12g01031 521 MobiDBLite consensus disorder prediction 458 488 - -
Accr12g01031 521 SUPERFAMILY WRKY DNA-binding domain 379 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 FunFam WRKY transcription factor 370 444 - -
Accr12g01031 521 Gene3D WRKY domain 368 444 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 Gene3D WRKY domain 198 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 ProSiteProfiles WRKY domain profile. 378 443 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 Pfam WRKY DNA -binding domain 210 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 Pfam WRKY DNA -binding domain 385 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 SMART WRKY_cls 383 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 SMART WRKY_cls 208 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 MobiDBLite consensus disorder prediction 297 330 - -
Accr12g01031 521 MobiDBLite consensus disorder prediction 45 69 - -
Accr12g01031 521 SUPERFAMILY WRKY DNA-binding domain 206 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01031 521 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01031 Accr-Chr12 10845802 10849962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01031 68 521 WRKY Transcription Factor Family AT4G30935 45.380 4.16e-110 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr12g01031 WRKY 5.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01031 - - pcin:129320486 798.119