Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01030 ATGCCGCTTCACAGTCATACATCGGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCCCGAGCACCGTCACGCTCTCCGGCCTCCGCCGATTCGAACCCTCGATCGTCCTGTTGAACGAGGGGATAAACGACAAGGTCGTGATAAAAGTGAAGGACAATATGATGACGATGATGATGATGACGACGATGAGAAGACGAACCGGAAACGAGTCTGTAAAGAACCGTCTAGCGAGTTACGGAATTGTAAACCTCCGGTTGAGGAGGCAGAGCCGCAAGAATCTACTTCAGAAACCCTAGTTATGTCCTCTTCGGTTGAATCGGCGATGGCTAGTAAGAGTGCTGACTTACCGGCCAGCTCTGCTACGCCGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGGACCTTCAAAAATGGAAACTAGTGTGAGAGAAACAGTCCAGGAAGCTAAGAATCAGACAGAAGATCGACTTGCATTGTCTATATGCCCAACTCCATTGTCTGCAGTATCACCATCTTCTGCTACACAACCTTTATCATCTATTCCTAGTTCAACTCTACCAGAACAGAGACTATCTCCTCTGAACGTTAGTAATGGACATGTGCTGGGAGCAGGCAAGAAAATTTTTTCTGGCGGTAAAGGTTTTTCTGCTGTCAATGTTGCGAGGGCATCTGCATCTGATGGATACAACTGGCGCAAGTATGGTCAGAAGCAGGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTACTGCAAAGAAGATTGAATTTTGTGATCATTCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAGCCACGAGCCACTACGGAAGACTAACCCTAACACCACTGGTGAAATTAAGTTCCTGCCATCTAATGAACCTACTGCTGAAGCCAATCTTCCAGAACAGCTCATTGGAGTGCCCAAGGATGCAGATCCAACCTCTTCTAAAAAAGAACCTCTACAAGATTTACCGTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAATTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAACAAGAGTGAAGAATGGTGACTTAACGAACTTGGACTCGCATGTAGAACCTGGAAAGAATTCTAAGTATGTTTTGCATGCAGCAGGGGATGTTGGAATATCAAGTGATGGTTACCGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCCCATCCCAGAAATTACTACCGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTCGATGATCCTGGTGCTGTCATCATTACATATAAAGGAGCACACAACCATGACAAGCCTGTGTCCAAGAAACGACATGGCCCACCAAGTGCTTCTCCTGGCGCTGCAACTGCCCCTGCCTCGTCAAACAATTTGCAAGGCACGCTTACTGATTCACAGCGAAACCAAGAAAATTCTGCTCAGTGGTCGGTGGACTCTGAAGAAGAATTAACTGAAGACGCCTCTGACCTTGGGGGTGAGAAAGCAATCGAGTCGGCTCGAACTCTCTTAAGCATGGGTGAAATTAAGCCTTGCTGA 1641 0.4631 MPLHSHTSDPIKRLSSLFRTIPYAAMPEHRHALRPPPIRTLDRPVERGDKRQGRDKSEGQYDDDDDDDDDEKTNRKRVCKEPSSELRNCKPPVEEAEPQESTSETLVMSSSVESAMASKSADLPASSATPIDGRDESKEPNGPSKMETSVRETVQEAKNQTEDRLALSICPTPLSAVSPSSATQPLSSIPSSTLPEQRLSPLNVSNGHVLGAGKKIFSGGKGFSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCTAKKIEFCDHSGHMIEIIYKGQHSHEPLRKTNPNTTGEIKFLPSNEPTAEANLPEQLIGVPKDADPTSSKKEPLQDLPCSADKKRQNSSGLSENGKFILKVEHVDEPELKTRVKNGDLTNLDSHVEPGKNSKYVLHAAGDVGISSDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQIETAVDDPGAVIITYKGAHNHDKPVSKKRHGPPSASPGAATAPASSNNLQGTLTDSQRNQENSAQWSVDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01030 546 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 158 498 IPR044810 GO:0003700
Accr12g01030 546 MobiDBLite consensus disorder prediction 143 165 - -
Accr12g01030 546 Gene3D WRKY domain 393 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 Gene3D WRKY domain 223 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 MobiDBLite consensus disorder prediction 70 94 - -
Accr12g01030 546 MobiDBLite consensus disorder prediction 322 355 - -
Accr12g01030 546 Pfam WRKY DNA -binding domain 410 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 Pfam WRKY DNA -binding domain 235 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 MobiDBLite consensus disorder prediction 98 125 - -
Accr12g01030 546 SUPERFAMILY WRKY DNA-binding domain 231 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 ProSiteProfiles WRKY domain profile. 228 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 SUPERFAMILY WRKY DNA-binding domain 404 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 FunFam WRKY transcription factor 395 469 - -
Accr12g01030 546 MobiDBLite consensus disorder prediction 32 59 - -
Accr12g01030 546 MobiDBLite consensus disorder prediction 461 529 - -
Accr12g01030 546 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g01030 546 MobiDBLite consensus disorder prediction 483 513 - -
Accr12g01030 546 MobiDBLite consensus disorder prediction 28 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01030 Accr-Chr12 10845727 10849962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01030 93 546 WRKY Transcription Factor Family AT4G30935 45.380 7.34e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr12g01030 WRKY 5.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01030 - - pcin:129320486 848.195