Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr12g01030 | ATGCCGCTTCACAGTCATACATCGGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAACCATCCCCTATGCGGCCATGCCCGAGCACCGTCACGCTCTCCGGCCTCCGCCGATTCGAACCCTCGATCGTCCTGTTGAACGAGGGGATAAACGACAAGGTCGTGATAAAAGTGAAGGACAATATGATGACGATGATGATGATGACGACGATGAGAAGACGAACCGGAAACGAGTCTGTAAAGAACCGTCTAGCGAGTTACGGAATTGTAAACCTCCGGTTGAGGAGGCAGAGCCGCAAGAATCTACTTCAGAAACCCTAGTTATGTCCTCTTCGGTTGAATCGGCGATGGCTAGTAAGAGTGCTGACTTACCGGCCAGCTCTGCTACGCCGATTGATGGCAGAGATGAAAGTAAGGAGCCAAATGGACCTTCAAAAATGGAAACTAGTGTGAGAGAAACAGTCCAGGAAGCTAAGAATCAGACAGAAGATCGACTTGCATTGTCTATATGCCCAACTCCATTGTCTGCAGTATCACCATCTTCTGCTACACAACCTTTATCATCTATTCCTAGTTCAACTCTACCAGAACAGAGACTATCTCCTCTGAACGTTAGTAATGGACATGTGCTGGGAGCAGGCAAGAAAATTTTTTCTGGCGGTAAAGGTTTTTCTGCTGTCAATGTTGCGAGGGCATCTGCATCTGATGGATACAACTGGCGCAAGTATGGTCAGAAGCAGGTGAAGAGTCCAACTGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTACTGCAAAGAAGATTGAATTTTGTGATCATTCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAGCCACGAGCCACTACGGAAGACTAACCCTAACACCACTGGTGAAATTAAGTTCCTGCCATCTAATGAACCTACTGCTGAAGCCAATCTTCCAGAACAGCTCATTGGAGTGCCCAAGGATGCAGATCCAACCTCTTCTAAAAAAGAACCTCTACAAGATTTACCGTGCAGTGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTAAATTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGCTGAAAACAAGAGTGAAGAATGGTGACTTAACGAACTTGGACTCGCATGTAGAACCTGGAAAGAATTCTAAGTATGTTTTGCATGCAGCAGGGGATGTTGGAATATCAAGTGATGGTTACCGATGGCGCAAGTATGGACAGAAAATGGTCAGGGGAAATTCCCATCCCAGAAATTACTACCGATGCACGTCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGACTGCAGTCGATGATCCTGGTGCTGTCATCATTACATATAAAGGAGCACACAACCATGACAAGCCTGTGTCCAAGAAACGACATGGCCCACCAAGTGCTTCTCCTGGCGCTGCAACTGCCCCTGCCTCGTCAAACAATTTGCAAGGCACGCTTACTGATTCACAGCGAAACCAAGAAAATTCTGCTCAGTGGTCGGTGGACTCTGAAGAAGAATTAACTGAAGACGCCTCTGACCTTGGGGGTGAGAAAGCAATCGAGTCGGCTCGAACTCTCTTAAGCATGGGTGAAATTAAGCCTTGCTGA | 1641 | 0.4631 | MPLHSHTSDPIKRLSSLFRTIPYAAMPEHRHALRPPPIRTLDRPVERGDKRQGRDKSEGQYDDDDDDDDDEKTNRKRVCKEPSSELRNCKPPVEEAEPQESTSETLVMSSSVESAMASKSADLPASSATPIDGRDESKEPNGPSKMETSVRETVQEAKNQTEDRLALSICPTPLSAVSPSSATQPLSSIPSSTLPEQRLSPLNVSNGHVLGAGKKIFSGGKGFSAVNVARASASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCTAKKIEFCDHSGHMIEIIYKGQHSHEPLRKTNPNTTGEIKFLPSNEPTAEANLPEQLIGVPKDADPTSSKKEPLQDLPCSADKKRQNSSGLSENGKFILKVEHVDEPELKTRVKNGDLTNLDSHVEPGKNSKYVLHAAGDVGISSDGYRWRKYGQKMVRGNSHPRNYYRCTSAGCPVRKQIETAVDDPGAVIITYKGAHNHDKPVSKKRHGPPSASPGAATAPASSNNLQGTLTDSQRNQENSAQWSVDSEEELTEDASDLGGEKAIESARTLLSMGEIKPC | 546 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr12g01030 | 546 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 158 | 498 | IPR044810 | GO:0003700 | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 143 | 165 | - | - | |
Accr12g01030 | 546 | Gene3D | WRKY domain | 393 | 469 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | Gene3D | WRKY domain | 223 | 292 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 70 | 94 | - | - | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 322 | 355 | - | - | |
Accr12g01030 | 546 | Pfam | WRKY DNA -binding domain | 410 | 465 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | Pfam | WRKY DNA -binding domain | 235 | 290 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | SMART | WRKY_cls | 408 | 467 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | SMART | WRKY_cls | 233 | 291 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 98 | 125 | - | - | |
Accr12g01030 | 546 | SUPERFAMILY | WRKY DNA-binding domain | 231 | 290 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | ProSiteProfiles | WRKY domain profile. | 228 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | SUPERFAMILY | WRKY DNA-binding domain | 404 | 468 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | FunFam | WRKY transcription factor | 395 | 469 | - | - | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 32 | 59 | - | - | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 461 | 529 | - | - | |
Accr12g01030 | 546 | ProSiteProfiles | WRKY domain profile. | 403 | 468 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 483 | 513 | - | - | |
Accr12g01030 | 546 | MobiDBLite | consensus disorder prediction | 28 | 165 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr12g01030 | Accr-Chr12 | 10845727 | 10849962 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr12g01030 | 93 | 546 | WRKY Transcription Factor Family | AT4G30935 | 45.380 | 7.34e-110 | 334 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Accr12g01030 | WRKY | 5.5e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr12g01030 | - | - | pcin:129320486 | 848.195 |