Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01021 ATGGCTGAACAACGCTATGAAGACTCTCACTCTGCTATACTCCATGGGAAGTACGAGCTGGGTCGGCTTCTGGGTCACGGAACATTCGCGAAGGTGTATCATGCTCGGAATTTACATACAGGGAAAAGCGTGGCGATAAAGGTCATCTCCAAAGAGAAGGTAATAAAAGTGGGAATGATGGAACAAATCAAGAGAGAAATATCAGTGATGAACATGGTGAAGCATCCAAACATTGTCGAGCTTTACGAAGTTATGGCCAGCAAATCCAAGATTTACATCGCCATGGAGTTAGTTCGAGGCGGTGAGCTCTTCAAGAAAGTCGCTCGAGGTCGATTGAAAGAAGACGTTGCCAGAGTGTATTTCCAGCAATTAATCTCCGCCGTCGATTTCTGCCATAGCCGCGGCGTTTACCACCGCGACCTCAAGCCGGAGAATCTGCTTCTCGACGAGGATGGAAACCTCAAGGTCACTGATTTTGGTCTCAGCACTTTCTCCGATGGTTTATTGCATACTACTTGTGGTACTCCGGCGTATGTGTCGCCGGAGATAATTAGTAAAAAAGGCTACGACGGTGCGAAATCGGATATTTGGTCTTGTGGTGTTATCTTATACGTCCTTCTGGCCGGATTTTTACCATTTCAGGACGACAATTTGATTTCTATGTATAAAAAGATTTACAGAGGCGACTTCAGATGTCCGAGGTGGTTTTCACCGGAAGCTCGGCGACTCATCATAAAGCTCCTCGACCCGAACCCGAACACTCGAATTACGATTTCAAAAATCATGGACTCATCGTTCTTCAAGAAATCGATTCCGAGGAGCTTGAGGACGAAAACAGGGGAGGAATTTGAAGAGAAATGCGATGATAATTTTGAGAAATTATCGAAGCAGAATCAGCCTGCGACGATGAACGCGTTCCATTTGATATCGCTATCGGAAGGTTTTGACTTGTCGCCGTTGTTCTCGGAGAAGAGGGAAGAGAAAGAGGAGATGAGGTTCGCGACAGCGAGGCCGGCGAGCAGCGTAATATCGAAGCTAGAGGAGGTGGCAAGGGCGGAGAGATTTAACGTGAAGAAGAGCGACACCATGGTAAGGCTGCAGAGGCAGGAGTTTGGACGGAAGGGGAGGCTAGCAATTGCGGCGGAGATATACGCCATGACGCCGTCGCTGGCGTTGGTGGAGGTGAAGAAGGATAACGGTGATACCTTGGAGTACAATCAGTTCTGCAGCAAGGAGCTCCGACCCGCACTCAAAGACATTGCATGGAAGTCACCGTCGGATAACCCGACCCGGATAAACCCATAG 1305 0.4835 MAEQRYEDSHSAILHGKYELGRLLGHGTFAKVYHARNLHTGKSVAIKVISKEKVIKVGMMEQIKREISVMNMVKHPNIVELYEVMASKSKIYIAMELVRGGELFKKVARGRLKEDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSDGLLHTTCGTPAYVSPEIISKKGYDGAKSDIWSCGVILYVLLAGFLPFQDDNLISMYKKIYRGDFRCPRWFSPEARRLIIKLLDPNPNTRITISKIMDSSFFKKSIPRSLRTKTGEEFEEKCDDNFEKLSKQNQPATMNAFHLISLSEGFDLSPLFSEKREEKEEMRFATARPASSVISKLEEVARAERFNVKKSDTMVRLQRQEFGRKGRLAIAAEIYAMTPSLALVEVKKDNGDTLEYNQFCSKELRPALKDIAWKSPSDNPTRINP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01021 434 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Accr12g01021 434 Gene3D Kinase associated domain 1, KA1 298 423 - -
Accr12g01021 434 CDD STKc_SnRK3 17 266 - -
Accr12g01021 434 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Accr12g01021 434 FunFam Non-specific serine/threonine protein kinase 298 422 - -
Accr12g01021 434 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Accr12g01021 434 ProSiteProfiles Protein kinase domain profile. 18 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01021 434 FunFam Non-specific serine/threonine protein kinase 11 305 - -
Accr12g01021 434 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Accr12g01021 434 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Accr12g01021 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Accr12g01021 434 SMART serkin_6 18 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g01021 434 CDD CIPK_C 304 418 - -
Accr12g01021 434 Pfam NAF domain 300 359 IPR004041 GO:0007165
Accr12g01021 434 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 419 - -
Accr12g01021 434 Gene3D Transferase(Phosphotransferase) domain 1 100 297 - -
Accr12g01021 434 Pfam Protein kinase domain 18 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01021 Accr-Chr12 10754660 10755964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01021 9 424 CBL-interacting serine-threonine protein kinases AT4G30960 72.170 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr12g01021 Pkinase 9.5e-74 CL0016