Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01018 ATGGCTGGGACTGGAGTTTTTGCAGAGATTTTTGATGGAGAAATGTGCAAGTATTACGCTGATGGAGAATGGAAGAAGTCTTCTTCTGGGAAAAGTGTTCCTATTATCAATCCCACTAGCAGAAAGACTCAGTACAAAGTTCAGGCTTGTACACAAGAAGAGGTCAATAAGGTGATGGATACGGCAAAATCTGCACAGAAGTCATGGGCAAAGACACCACTGTGGAAAAGAGCCGAGCTTCTTCACAAGGCAGCTGCCCTTCTTAAAGAACACAAAGCTCCAATTGCAGAGTGTCTTGTGAAAGAAATTGCAAAACCAGCTAAAGATTCTGTCACAGAGGTTGTGAGGTCTGGGGATCTAATTTCTTACTGTGCTGAAGAAGGTGTGAGGATTCTGGGAGAGGGCAAGTTCTTGGTATCAGATAGCTTTCCAGGAAATGAAAGGACCAAGTATTGCCTCACATCCAAGATTCCATTGGGAGTAGTTTTAGCCATTCCTCCATTTAATTATCCGGTAAATCTTGCTGTCTCAAAAATTGCTCCTGCATTGATTGCTGGAAACTCACTTGTGCTCAAGCCTCCTACTCAGGGAGCTGTTTCTTGTCTGCATATGGTGTACTGCTTTCACTTAGCTGGTTTTCCCAAAGGCTTAATCAGCTGTGTCACTGGCAAAGGTTCTGAGATTGGTGATTTCCTTACAATGCACCCAGGAGTGAACTGTATAAGCTTCACCGGTGGAGATACTGGCATTTCGATTTCAAAGAAGGCGGGCATGATCCCTCTGCAAATGGAGTTGGGAGGAAAAGATGCCTGCATTGTACTTGAAGACGCTGACCTTGATTTGGTAGCTTCTAACATTATTAAAGGAGGGTTCTCATACAGTGGTCAGAGGTGCACCGCAGTTAAGGTTGTCCTAGTGATGGAATCTGTTGCTGATGCTTTGGTGGAGAAGGTTAAGGCTAAGGTGGCGAAACTGACTGTGGGACCACCGGAAAACAACTGTGACATCACTCCGGTGGTGACAGAGTCATCGGCGAACTACATAGAAGGTCTTGTAAAGGATGCTAAAGAGAAAGGAGCAACATTCTGCCAAGAGTACAGGAGAGAAGGAAATCTGATTTGGCCTTTGCTTCTGGATAATGTGAGGCCTGATATGAGAATTGCATGGGAGGAACCATTTGGACCAGTCTTGCCTGTCATTAGAATCAATTCTGTTGAAGAAGGAATCCACCATTGCAATGCTAGCAATTTTGGACTTCAGGGTTGTGTTTTCACAAAGGATGTGAACAAAGCAATTTTGATCAGTGATGCAATGGAGACAGGAACGGTTCAGATAAACTCAGCCCCAGCCCGAGGACCCGATCATTTCCCCTTCCAGGGTATCAAGGACAGTGGAATTGGATCACAAGGGATTACAAACAGCATAAACATGATGACCAAGGTCAAGACCACTGTCATTAACTTGCCCACACCTTCTTATACCATGGGCTAG 1491 0.448 MAGTGVFAEIFDGEMCKYYADGEWKKSSSGKSVPIINPTSRKTQYKVQACTQEEVNKVMDTAKSAQKSWAKTPLWKRAELLHKAAALLKEHKAPIAECLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVSCLHMVYCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVASNIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKAKVAKLTVGPPENNCDITPVVTESSANYIEGLVKDAKEKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDVNKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01018 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Accr12g01018 496 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 267 457 - -
Accr12g01018 496 CDD ALDH_F11_NP-GAPDH 17 487 - -
Accr12g01018 496 PANTHER ALDEHYDE DEHYDROGENASE 1 495 - -
Accr12g01018 496 SUPERFAMILY ALDH-like 15 487 IPR016161 GO:0016491
Accr12g01018 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 483 IPR016162 GO:0016491
Accr12g01018 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Accr12g01018 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 457 IPR016163 GO:0016620
Accr12g01018 496 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 281 - -
Accr12g01018 496 Pfam Aldehyde dehydrogenase family 24 483 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01018 Accr-Chr12 10676598 10680641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01018 1 496 Aldehyde Dehydrogenase Gene Family AT2G24270 92.137 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01018 K00131 - qsu:111987214 932.939