Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00989 ATGGAGATTTTTAAATTTTTCTACTTCAATCTCCTTCTTGTTGCCACTTTTTCCATTTTCTTCTTGGCTGTTTCAGCAATGGACCCTTATTCTGATGCACTCATAAGCCTGAAATCTGAACTTGTGGATGTTGAAGACAGTTTAAGTGACTGGGTGGTTGAGCCTTCTGGAGGAAATTCAACCGGGAAATCCAATGCTTATTGCTGTTCTTGGAATGGAATCAAGTGTGATAACAGCTCAAAAACTGTAACTTCCATAGACTTGTCCATGAAGAAACTGGGAGGTGTAATGTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAGTATCTCAACCTCAGTCATAATTTCTTCTCTGGGCAACTTCCTGTGGGAATCTTCAACCTCACTAGTCTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCAGTTCCCAGGTGGGATTTCAAGCCTTAAAAACTTGCTTGCACTTGATGCTTTTAGCAACAGCTTTTCTGGGCCATTGCCTGCTGAACTTTCTCAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGGAATCTTCTCTCTGGAAATCTACCTCCAGAATTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCATGGTTTTATTCCACCTGAGTTAGGTAACATGAGTGAACTTAGGTATCTTGATATTGCTGGTGCAAATCTCTCTGGTCCAATACCAAAGCAACTCTCCAATCTCACCAATTTGCAGTCGCTTTATCTGTTCAGAAACCAGCTCATGGGATCAATTCCAAGTGAGTTTAGCAATATCAAGTCACTCACAGAATTAGATCTTTCTGATAATTTCATCTCTGGGCCCATTCCTGAAAGCTTCTCAAAGTTAGAGAACCTGAGGCTGCTCAGTCTCATGTATAATGAGATGAATGGCACTGTTCCCGAAGGCATTGCACAACTTCCAAACTTAGAAACTCTTCTTATTTGGAGCAATGACTTCTCTGGTTCACTTCCGCAGAGTTTAGGCAAGAACTCGAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACCAGACATTTGTATGAGAGGAGTATTATATAAGCTGATTCTATTTTCAAACAGATTCTCAGGTAGCCTCTCACCATCTCTCTCAAATTGTTCATCACTCGTTCGTCTTCGCTTGGAAGATAACTTGTTCACAGGGAATATCCCTTTGAAATTCAGACATCTTCCTGATATATCATATGTTGACCTATCCAGAAATAAATTTCTTGGTGGGATCCCCTCAGATATTTCCCAAGCTATCAAGCTTGCTTACTTGAATGTCTCCAATAATCCACAATTAGGAGGCACCATCCCTACACAAACATGGTCTTTGCCACTTCTGCAAAATTTTTCAGCCTCTTTCTGTGGTATTTCAGGAAAAATTCCCCCATTTGAGTCCTGCAAATCAGTCTCTAGCATTGACCTTGATACGAACAACTTGTTAGGAACGATCTCATTCACTATTTCAAATTGCAAAAATCTTGAGATCATAAAATTATCCAACAATAATTTATCTGGTCCTATACCTGATCAGCTTGCAAGCATCCCGGTCCTTGGTGTAGTAGACCTATCACACAATAACCTCAGTGGCCCTATACCTGCAAAGTTTAGCACTTCTTCAAGCTTACAACTTCTTAATGTGTCATTCAACTACATCTCCGGATCGATTCCTGCAGGAAAGTTATTCAGCTTCATGGATTCCAGTGCATTTGTTGGGAATCCAGAGCTATGTGGAGCACCTCTACGACCATGTTCTGATTCAGTAGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTGTGGTGCTATTGTGTGCAGGATTGCTTATATTCCTTATTGCAGCATTAGCTTTTGGAATAGTTTATTTCAGGCGAGGAGTTAAAAGCCAATGGAAGATGATCTCATTTGTTGGTCTCCCTCAGTTCACAGCAAACGATGTTTTGACGAGTTTCAATACCAAAGAATCAAGAGAAGTGGCAACAAAACCATCACCTTCAGTTTCAAAAGCTGTTTTGCCAACTGGAATAACAGTTTTGGTGAATAAGATTGAGTGGGAAAAGAGGAACATTAAACAGGTGTCACAGTTTATAATGAGACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTTGGGTTTTGCTACAACCAGAGTCTAGCTTATATGTTATATGACTACTTACCTAATGGGAACTTGGCTGAGAAAATTGGGATGAAAAGGGATTGGGAAGCTAAATTCAGAATTGTGATTGGCATTGCCAAGGGACTTAGCTTCCTTCACCATGACTGTTACCCAGCCATACCACATGGAAACTTGAAGTCTAGCAATGTAGTATTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAGCATGTGTTGAAGTTGAGCAAAGGTTCATCTCCTTCCACAACTTCTAGCTGGGAACCAGAATACAATGAAGCCATGAAAGAGGAATTCTACGCCGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGAAAAATGCAGCAGCTAGCATACAAAGCAAACCAAGAGAGGTTCTTTTGAGAGAAATTTATGATGAAAATGATGTGAGTTCTGCCAGTTCATTGCAAGAGATCAAAATGGTTCTTGAAGTGGCTTTGCTTTGCACCAGAAGCAAGTCATTTGATCGCCCATCCATGGAAGATGCCTTGAAGCTTTTGTCAGGGTCAAAGCCTCCAGAAGATCACAAATATTAG 2892 0.4042 MEIFKFFYFNLLLVATFSIFFLAVSAMDPYSDALISLKSELVDVEDSLSDWVVEPSGGNSTGKSNAYCCSWNGIKCDNSSKTVTSIDLSMKKLGGVMSGKQFSVFTKLEYLNLSHNFFSGQLPVGIFNLTSLRSLDISRNNFSGQFPGGISSLKNLLALDAFSNSFSGPLPAELSQLENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYHGFIPPELGNMSELRYLDIAGANLSGPIPKQLSNLTNLQSLYLFRNQLMGSIPSEFSNIKSLTELDLSDNFISGPIPESFSKLENLRLLSLMYNEMNGTVPEGIAQLPNLETLLIWSNDFSGSLPQSLGKNSNLMWVDVSTNNFVGSIPPDICMRGVLYKLILFSNRFSGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNKFLGGIPSDISQAIKLAYLNVSNNPQLGGTIPTQTWSLPLLQNFSASFCGISGKIPPFESCKSVSSIDLDTNNLLGTISFTISNCKNLEIIKLSNNNLSGPIPDQLASIPVLGVVDLSHNNLSGPIPAKFSTSSSLQLLNVSFNYISGSIPAGKLFSFMDSSAFVGNPELCGAPLRPCSDSVGILGSKGTWKLTSVVLLCAGLLIFLIAALAFGIVYFRRGVKSQWKMISFVGLPQFTANDVLTSFNTKESREVATKPSPSVSKAVLPTGITVLVNKIEWEKRNIKQVSQFIMRLGNARHKNLIRLLGFCYNQSLAYMLYDYLPNGNLAEKIGMKRDWEAKFRIVIGIAKGLSFLHHDCYPAIPHGNLKSSNVVFDENMEPHLAEFGLKHVLKLSKGSSPSTTSSWEPEYNEAMKEEFYADVYKFGEMILEILTNGRLKNAAASIQSKPREVLLREIYDENDVSSASSLQEIKMVLEVALLCTRSKSFDRPSMEDALKLLSGSKPPEDHKY 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00989 963 Pfam Protein tyrosine and serine/threonine kinase 725 950 IPR001245 GO:0004672|GO:0006468
Accr12g00989 963 SMART LRR_typ_2 201 225 IPR003591 -
Accr12g00989 963 SMART LRR_typ_2 105 129 IPR003591 -
Accr12g00989 963 SMART LRR_typ_2 345 369 IPR003591 -
Accr12g00989 963 SMART LRR_typ_2 273 296 IPR003591 -
Accr12g00989 963 SMART LRR_typ_2 297 320 IPR003591 -
Accr12g00989 963 SUPERFAMILY L domain-like 314 629 - -
Accr12g00989 963 Pfam Leucine Rich Repeat 107 123 IPR001611 GO:0005515
Accr12g00989 963 Gene3D Ribonuclease Inhibitor 395 634 IPR032675 -
Accr12g00989 963 Pfam Leucine rich repeat 299 357 IPR001611 GO:0005515
Accr12g00989 963 PANTHER UNNAMED PRODUCT 105 185 - -
Accr12g00989 963 SMART tyrkin_6 657 952 IPR020635 GO:0004713|GO:0006468
Accr12g00989 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 689 774 - -
Accr12g00989 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 775 960 - -
Accr12g00989 963 SUPERFAMILY Protein kinase-like (PK-like) 714 953 IPR011009 -
Accr12g00989 963 Gene3D Transferase(Phosphotransferase) domain 1 773 962 - -
Accr12g00989 963 Gene3D Ribonuclease Inhibitor 291 394 IPR032675 -
Accr12g00989 963 Gene3D Ribonuclease Inhibitor 30 194 IPR032675 -
Accr12g00989 963 FunFam Leucine-rich repeat receptor-like protein kinase 27 195 - -
Accr12g00989 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 318 632 - -
Accr12g00989 963 Pfam Leucine rich repeat N-terminal domain 32 77 IPR013210 -
Accr12g00989 963 Gene3D Phosphorylase Kinase; domain 1 677 772 - -
Accr12g00989 963 SUPERFAMILY RNI-like 85 407 - -
Accr12g00989 963 Gene3D Ribonuclease Inhibitor 195 290 IPR032675 -
Accr12g00989 963 FunFam Leucine-rich repeat receptor-like protein kinase TDR 196 299 - -
Accr12g00989 963 ProSiteProfiles Protein kinase domain profile. 654 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00989 Accr-Chr12 10429656 10433230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00989 2 956 Receptor kinase-like Gene Family AT5G51350 54.969 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr12g00989 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00989 - - aprc:113852384 1389.4