Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00966 ATGAATTTCGCCCCTACTCTGCGATCTGGAGAGTGGTCCGATATCGGACGTCGCCCCAATATGGAAGATACTCACATCTGTATTGGAGACTTACGACAAAAGTTTGGTAATGATGTGCTGAGGAACGAAGTTATTTCCTTTTATGGGGTATTTGATGGACATGACGGGAAGAGCGCTGCGGAATTTGTCCGTGATCATCTTCCAAGATTTGTTATTGAGGATGCTGGTTTTCCTGTGGAGCTGCAGGAGGTAGTCACAAGGTCATTTTTAGAGACAGATGCTGCATTTGCAGAGACATATCCCCTTGAGTCTTCTGGCACAACTGCATTAATTGCAATCATTTTTGGGAGGTCTTTGCTAGTGGCCAATGCTGGAGATTGCAGGGCTGTTTTGTCCAGACGTGGAACGGCGATAGAGATGTCCAAAGATCATACGCCCTTGTGCATGGAAGAGAGGGAGCGAATTGCACCTCTTGGTGGATACATCGTTGGCGGTTATCTGAATGGCCAGTTAGGAGTGACACGGGCGCTAGGCGACTGGCATCTCGAGGGCTTGAAGGAAATGAGCGAAAGAGGAGGGCCCTTGAGTGCTGAGCCAGAACTCAAACTTACCACACTGACCAAAGAGGATGAGTTTCTGATTATTGCAAGTGATGGAATCTGGGATGTTTTCCGCAGCCAAAATGCAGTGGATTTTGCAAGGGGGCGGCTTCAGGAACATAATGATGTGAAACTATGCTGTAAAGAGATGGTGGAGGAAGCCTTAAAGAGGTATTCGACCGATAACTTAACTGTTGTGATGGTGTGTTTTCACTCAGAACCACCACCACCACCACGACCTGTCGACCTGTGGTGGTAG 858 0.479 MNFAPTLRSGEWSDIGRRPNMEDTHICIGDLRQKFGNDVLRNEVISFYGVFDGHDGKSAAEFVRDHLPRFVIEDAGFPVELQEVVTRSFLETDAAFAETYPLESSGTTALIAIIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHTPLCMEERERIAPLGGYIVGGYLNGQLGVTRALGDWHLEGLKEMSERGGPLSAEPELKLTTLTKEDEFLIIASDGIWDVFRSQNAVDFARGRLQEHNDVKLCCKEMVEEALKRYSTDNLTVVMVCFHSEPPPPPRPVDLWW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00966 285 ProSiteProfiles PPM-type phosphatase domain profile. 8 270 IPR001932 -
Accr12g00966 285 CDD PP2Cc 8 270 IPR001932 -
Accr12g00966 285 SUPERFAMILY PP2C-like 5 272 IPR036457 -
Accr12g00966 285 PANTHER PROTEIN PHOSPHATASE 2C 9 268 IPR015655 GO:0004722|GO:0006470
Accr12g00966 285 Gene3D - 3 274 IPR036457 -
Accr12g00966 285 FunFam Probable protein phosphatase 2C 22 1 273 - -
Accr12g00966 285 SMART PP2C_4 1 268 IPR001932 -
Accr12g00966 285 Pfam Protein phosphatase 2C 16 262 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00966 Accr-Chr12 10181817 10183922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00966 3 276 PP2C-type Phosphatase Gene Family AT2G25620 59.786 3.07e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Accr12g00966 PP2C 4.3e-63 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00966 K14803 - gmx:100782648 441.81