Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00964 ATGTGTTTACAGGACGCCGAGCAAGTTGGCGCCGATATGGAGAACCCAGATGATAGAAGAATGTCTTGGCCTTTGCATTGCGACCTCTTGCATACCCACATGGAAAAGGAAGCTCCTTTTAGAACTTCCGATGATCGGAGTTTCTGTTTTGGGAATTCATTTCCGATGGAAAGCATAAATGAGGACACAGTGATTGCAGACAAAAAACAGAACCAGATGAACTTTGCCCCGACTCTGCGATCTGGAGAGTGGTCCGATATCGGAGGTCGCCCCTATATGGAAGATACTCACATCTGTATTGGAGACTTAGGAAAAAAGTTTGGTTATGATGTGCTCAGTGAGGAAGTTATTTCCTTTTATGGGGTATTTGATGGACACGGAGGGAAGAGCGCCGCGTTATTTGTCCGTGATCATCTTCCAAGAGTTGTTATTGAGGATGCTGATTTTCCTGTGGAGCTGGAGAAGGTAGTCACAAGGTCATTTTTACAGACAGATGCTGCATTTGCAGAGACATGTTCCCTTGAGTCTTCATTGTCTTCTGGTACAACTGCATTAACTGCAATCATTTTTGGGAGGTCTTTGCTGGTGGCCAATGCTGGAGATTGCAGGGCTGTTTTGTCCAGACGTGGAAGGGCGATAGAGATGTCCAAAGATCATAGGCCCTTGTGCATGAAAGAGAGGAAGCGAATTGAATCTCTGGGTGGATACATCGATGACGGTTATCTGAATGGCCAGTTAGGCGTGACACGGGCACTAGGCGACTGGCATCTCGAGGGCTTGAAGGAAATGAGCGAAAGAGGAGGGCCCTTGAGTGCTGAGCCAGAACTCAAACTTACCACATTGACCAAAGAGGATGAGCTTCTGATTATTGCAAGTGATGGAATCTGGGATGTTTTCAGCAGCCAAAATGCCGTGGATTTCGCAAGGAGGCGGCTTCAGGAACATAATGATGTGAAACTATGCTGTAAAGAGATGGTGGAGGAAGCCTTAAAGAGGGATTCGACCGATAACTTAACTGTTGTGATGGTGTGTTTTCACTCAGAACCACCACCACCTGTGGTGGTAGAGAGGCCAAGATTCAGAAGAAGCATATCTGCTGAGGGACTTCAGAATATCAAGTCCTTCCTGGAAGGATAG 1137 0.4661 MCLQDAEQVGADMENPDDRRMSWPLHCDLLHTHMEKEAPFRTSDDRSFCFGNSFPMESINEDTVIADKKQNQMNFAPTLRSGEWSDIGGRPYMEDTHICIGDLGKKFGYDVLSEEVISFYGVFDGHGGKSAALFVRDHLPRVVIEDADFPVELEKVVTRSFLQTDAAFAETCSLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRRGRAIEMSKDHRPLCMKERKRIESLGGYIDDGYLNGQLGVTRALGDWHLEGLKEMSERGGPLSAEPELKLTTLTKEDELLIIASDGIWDVFSSQNAVDFARRRLQEHNDVKLCCKEMVEEALKRDSTDNLTVVMVCFHSEPPPPVVVERPRFRRSISAEGLQNIKSFLEG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00964 378 CDD PP2Cc 80 345 IPR001932 -
Accr12g00964 378 PANTHER PROTEIN PHOSPHATASE 2C 67 343 IPR015655 GO:0004722|GO:0006470
Accr12g00964 378 Pfam Protein phosphatase 2C 92 337 IPR001932 -
Accr12g00964 378 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Accr12g00964 378 Gene3D - 60 349 IPR036457 -
Accr12g00964 378 SUPERFAMILY PP2C-like 73 347 IPR036457 -
Accr12g00964 378 ProSiteProfiles PPM-type phosphatase domain profile. 80 345 IPR001932 -
Accr12g00964 378 SMART PP2C_4 70 343 IPR001932 -
Accr12g00964 378 FunFam Probable protein phosphatase 2C 22 64 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00964 Accr-Chr12 10138007 10141451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00964 60 378 PP2C-type Phosphatase Gene Family AT2G25620 60.062 1.57e-138 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Accr12g00964 PP2C 1.1e-64 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00964 K14803 - gmx:100782648 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00964 12 10138007 10141451 Accr12g00964 12 10138007 10141451 ECH