Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00962 ATGGCAAGTAATGGTACTGAGAAGATCCCCATCAATGATGATACTGAAGTTTCAGAAGCTGCCATTGAGATAAAGATTAAAACTTTGGACTCACAAATTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAGGAACAGATTGCTTCTGTAACTGGAGTGTTGTCAGAGCGGCAGCGCCTAATTTGTCGAGGAAAAGTTCTAAAGGATGATCAACTCCTTTCTGCCTACCATGTTGAAGATGGTCATACCTTGCATCTCGTTGTGAGGCAACCTGATCTGCCCGGAAGTTTGCCCAATCAATCAGCACCTGAACCACATTCAACCACAAACAATAGTCACAGTAGTCAAATAGCTCCTGGCGTTTTTATTGAAACTTTCAATGTGCCTGTTCAGGGAGATGGGGTTCCTCCCGAAGTTAATAGGATTATTTCCGCTATTCTAGGATCTATTGGGATTTCAAATTTTCCAAGTGGCAGTGAAGGGATTGATGTCAGGGGACATGATTCTCGAGGGCTGGGGACTGGGAGAACATCAGGTTTTAGTGGTATAGCAGATTCATTTCATCCTCAACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATCACGCAGTGCATTTGGACTTCCAACAGCAGCTTCTTCTTTGGGATCATTACAGCCCCCTGTCATTCCTGATTCTTTGACAACTTTGTCTCAGTATGTGAGTCATCTAAGGCATGAATTTGAAGCCATTGTGAGAGAAGGGGGAAATAGCACCCAAGCAGCTGAGGCTCATAGGAATGAAGCATCAATTTCTTCTTCACCTTCAGGCTCTACACCAGAAGGGCTTTTGTCACCTGCGTACTTGGCGGAAGTCTTGCACTCTACCAGACAGATGTTCATTGAACAGGCTAACGAGTGCTTATTTCAACTTGCAACACAGCTCGAGAATCAAGCAAATGTAACTGATCCCTTGTTGCGGTCAAACACTCAGTCCAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCATTTTTACTCGAGCTTGGTCGTACGACCATGGCATTGCGTTTGGGTCAAACACCATCTGAAGCTGTAGCTAATGGCGGGCCAGCAGTTTTTATATCCTCATCTGGTCCTAACCATATTATGGTTCAGCCTCTTCCTTTTCAACCTGGAGCTAGCTTTGGTTCTGCCCCTGTTGGACCTGTGCAGCCCCCGTCTGGTTTAGGTAGTGGACTTGGTTCAAATTTTTACCCAAGGCGTATAGATATTCAGATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAAGAACACGGGGATACACAATCTGCTTCAGTACAAAGAAATCCTGCTGAAGTTTCCGTTAATCAGACAAGCTCGAGACTTCCAGAAGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCTAGCCACTTAGGTCGCAACCCTTCAGAATCTTCTGCTAATTCTATAGGGCTTTACTATCCTGTTATCGGGAGATTTCAGCATGCACCTTCTGGACATGGGAATAGTGAATCAGTATCTCAGCCTGCTAGTCAGCATCATGCATCTGCTTTTCATGCAGCGCAACAGTCAACACCTGAATCTACTGGGCAGAGGCAAAGCATGGATGATCCTGCAAGAAATGGATCTTCATCAGCTCCGAGCTTAAGACAAGAGCCATCTAATACCCGCAGGGTGAACATCAATGTTCTGTCGGCTGGTGGACTCCAGAGTAACCAAGAATCTGATAGGCAGATACCCAATAATGTACTTCAATTTATAAGAGCACTTTTTCCTGGTGGTGAAATTCATGTTGAAGATCCTAGTTCACAGGGAACGACTGGTGTTCCTACCTTAGATCATGCTGGAACATCAACAGGTGCTGCTCGTGTCCCCGAGTCAGAGCCCAGAGCTAGTGAGGAAGGAATATTTTTGTCTAATATACTCCGAGAGGTCATGCCCCTCATATCACAAGCAGGGTTTGGGACGCCTGGAACTCCTCAAGGTGAAAATGCTTCAGACAATAAAACAGCTGCTGATTCTTCTTCCCAGGGTGGGACGTCACGCAGACAAAGTGATTCTGATCCAAGCCCTCCAAATTCTAAACGCCGAAAGACGGAGTGA 2175 0.4552 MASNGTEKIPINDDTEVSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSLPNQSAPEPHSTTNNSHSSQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGSEGIDVRGHDSRGLGTGRTSGFSGIADSFHPQPEQAGLRNSSDRSRSAFGLPTAASSLGSLQPPVIPDSLTTLSQYVSHLRHEFEAIVREGGNSTQAAEAHRNEASISSSPSGSTPEGLLSPAYLAEVLHSTRQMFIEQANECLFQLATQLENQANVTDPLLRSNTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGQTPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGASFGSAPVGPVQPPSGLGSGLGSNFYPRRIDIQIRRGTSTSSANVNREEHGDTQSASVQRNPAEVSVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSHLGRNPSESSANSIGLYYPVIGRFQHAPSGHGNSESVSQPASQHHASAFHAAQQSTPESTGQRQSMDDPARNGSSSAPSLRQEPSNTRRVNINVLSAGGLQSNQESDRQIPNNVLQFIRALFPGGEIHVEDPSSQGTTGVPTLDHAGTSTGAARVPESEPRASEEGIFLSNILREVMPLISQAGFGTPGTPQGENASDNKTAADSSSQGGTSRRQSDSDPSPPNSKRRKTE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00962 724 MobiDBLite consensus disorder prediction 258 279 - -
Accr12g00962 724 Gene3D - 15 119 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 430 470 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 430 475 - -
Accr12g00962 724 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Accr12g00962 724 CDD Ubl_ubiquitin_like 24 91 - -
Accr12g00962 724 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Accr12g00962 724 MobiDBLite consensus disorder prediction 678 712 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 190 211 - -
Accr12g00962 724 SUPERFAMILY Ubiquitin-like 18 100 IPR029071 -
Accr12g00962 724 MobiDBLite consensus disorder prediction 624 638 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 196 211 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 98 119 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 675 724 - -
Accr12g00962 724 FunFam Large proline-rich protein BAG6 14 107 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 621 656 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 520 581 - -
Accr12g00962 724 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 12 722 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 254 279 - -
Accr12g00962 724 SMART ubq_7 22 93 IPR000626 GO:0005515
Accr12g00962 724 MobiDBLite consensus disorder prediction 522 581 - -
Accr12g00962 724 MobiDBLite consensus disorder prediction 94 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00962 Accr-Chr12 10079164 10088538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00962 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 2.82e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00962 K23390 - gmx:100783070 924.465