Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00948 ATGGCTGATCTAAAGGGAGGGACTCGACCGCCATGGGTGGGGCTTGGAGCTGCTGTGTGGTTTCAAGTGGCTGCCGGAAACTCTTACGGCTTCCCTCTCTACTCTCATTCTCTCAGATCAGTTCTGGGTTTTAGTCAGCTCCAGATTGCGTTGCTCGGTGTCGCTAACGACATTGGAGAGAGCGTCGGCGTTCTCCCTGGTATCGCCTCCAATAAGTTTCCTCCATGGCTCATTCTCTCCGTTGGTGCTCTTCACTCTTTTGTCGGCTATGGTGTTCTCTGGCTCTCTGTTAGCCGCACTCTTCCCTCTCTTCCTTATTGGTTGTTATGGATTGCTTCAGTTGTGGCCACCAACGGCGCTACATGGTTAGCCACACCTGTTCTTGTCACCAACATGAGAAACTTCCCTGCGAACAGAGGCACAGTCGCTGGAATCCTCAAAGGCTATCTAGGCTTAAGTGCTACAGTTTTCACTGTCGTTTACAGCCTAGTCCTTCACAATTCTTCAACCAAGTTCCTCTTGTTTCTTGCCCTTGGCATTCCTGTTACATGTTTTGCCTTGATGTTTCTTGTCAGGCCTTGCACTCCTGCTTCTGGCGAAGACCCCTCAGAAAATGGCCATTTTGTCTTCGTCCAAGCCTCTAGCATCGTTCTAGGTTTATACCTTCTTGCAACCACAGTAATTGGTGATGCTGTATCCTTAAGTGGGGTAGCATCCTATGCTTTGGTCTTTGTGATGATCCTCCTCCTCATGGCTCCTCTTGCTGTCCCTATAAAGATGACTTTGTTTCCCAGAAAAGCCATCAAACCAGAGGCACCTGAGCTACAAGCAGGATCTTCAGAACATGATGAGAAGTCAGAACCTTTGTTGATTCCAGTATCTTCATCTTCAGGAATGCTTGGGAGTTTTAATGACAATGATGAATCATCTGAGGTGGCTATGCTTCTTGCTGTGGGTGAAGGGGCAGTGAATAAGAAGAAGAGGAGGCCTAAAAGAGGGGAAGATTTCAACTTTCGCGAGGCAGTGATTAAAGCTGATTTTTGGCTTCTGTTTCTGGTTTTCTTTGTTGGGGTAGGAACTGGGGTTACCGTGGTTAATAATCTAGCACAGATTGGAATCGCACAAGGTGTGGAAAATACCACAATCTTGTTGTCCACTTTTGGCTTCTGCAATTTCGTGGGTCGGCTTGGTGGAGGAATTGTTTCTGAACATTTTGTCAGAACAAAGACTATCCCACGAACAGTGTGGTTCATATGCACACAGATGATAATGATCATCTTGTACCTGCTGTTTGCAAATGCTGTGAGCGGAACCCTTTATCCTGCAATAGCATTTTTGGGGATCTGCTTTGGCGTGCAATTCTCTGTATTGATTCCTACTGTTTCTGAGTTGTTTGGCTTGAGACACTTTGGCGTTATCTACAACTTCATGTGCTTGGGGAATCCTCTTGGTGCCTTTCTTTTCTCTGCCCTTTTGGCCAGCCATGTCTATGACGCTGAAGCCGCTAAGCAGCATGGTTTGAGCCACCTGGTGCATGACTCTATAACTAAGGCCTGCGTTGGTCCCTCTTGCTTTAGGCTGACCTTTTTGGTTCTGGCTGGTGTTTCTGCTGTGGGCTCCCTATTGAGCATTATTTTGACTGTGAGGGTGAAACCTGTTTATCAGATGCTTTATGCTAGTGGTTCTTTCAGGCATCCCCAATCCTCTTCAAGCCATTAA 1719 0.4695 MADLKGGTRPPWVGLGAAVWFQVAAGNSYGFPLYSHSLRSVLGFSQLQIALLGVANDIGESVGVLPGIASNKFPPWLILSVGALHSFVGYGVLWLSVSRTLPSLPYWLLWIASVVATNGATWLATPVLVTNMRNFPANRGTVAGILKGYLGLSATVFTVVYSLVLHNSSTKFLLFLALGIPVTCFALMFLVRPCTPASGEDPSENGHFVFVQASSIVLGLYLLATTVIGDAVSLSGVASYALVFVMILLLMAPLAVPIKMTLFPRKAIKPEAPELQAGSSEHDEKSEPLLIPVSSSSGMLGSFNDNDESSEVAMLLAVGEGAVNKKKRRPKRGEDFNFREAVIKADFWLLFLVFFVGVGTGVTVVNNLAQIGIAQGVENTTILLSTFGFCNFVGRLGGGIVSEHFVRTKTIPRTVWFICTQMIMIILYLLFANAVSGTLYPAIAFLGICFGVQFSVLIPTVSELFGLRHFGVIYNFMCLGNPLGAFLFSALLASHVYDAEAAKQHGLSHLVHDSITKACVGPSCFRLTFLVLAGVSAVGSLLSIILTVRVKPVYQMLYASGSFRHPQSSSSH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00948 572 Pfam Nodulin-like 11 258 IPR010658 -
Accr12g00948 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Accr12g00948 572 Gene3D MFS general substrate transporter like domains 201 551 IPR036259 -
Accr12g00948 572 SUPERFAMILY MFS general substrate transporter 14 195 IPR036259 -
Accr12g00948 572 CDD MFS_Mch1p_like 10 539 - -
Accr12g00948 572 SUPERFAMILY MFS general substrate transporter 236 552 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00948 Accr-Chr12 9897430 9900469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00948 5 572 Nodulin-like Gene Family AT1G80530 55.458 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00948 - - gmx:100794012 805.823