Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00932 ATGGTGAAGGGCAAGCTTATACTAATCAGTCAATCTGGTGGTGAATTTTTAACAAATGATGATGGATCTATGTCATATACTGGAGGTGAAGCACATGCAGTGGAGATTAATCATGAAACAAGTTTTGATGATCTCAAGCTAAAAATTGCTGAATTGTGGAATTTACAAACTAAGACCATGTCCATAAAGTATTTTCTTCCGGGGAACAGGAAAACTTTAATCTGTTTATCAAATGATCGAGACCTGAACAGGATGAAAGAATTTTATGCGGCTTCAATTACGGCTGACGTTTTTATTTCTGGTAAAGAAGGGTTTGACCAGGAATCCTTAAACATGAATACCAGGAGAAATAATATAAATGTAGCTGAAGCTGTGACCCCTGCCAATCCTTCAAAAACAAAATCCAAAACTGTTCGCAAACGAATAGCATCAGCTGGCACTTCTGCTAACCGTTCTCCAAATCATGCTGTTAACAACAAGCATGGTGCGGCCTGTTCCAGGCCACCTGGTTCTGTTGCCATTGTCACTGATACATCCTCCCATGGCGGAATTTTAAGTGATATGGATGCTAGTCCTGCAGATGCAGTTAAGAAGCGAAGGCGTGCTGCATCTCGTGCAGTTACTGCAAATGGTCCAACAATTGAAGCAGCATCGGGAGAAAATAATAAGGTGATGCCACGGAAAAAGAATAAGAAAGATCATGGTGGTGCTGCTGCTGATAATGGAAAGCATCAACTAGATCTGCTATTTAATGAGGATTCTGACAATTTACTTGTTGGAACTGACATAACTCCGGGGAAATTAGCCGAATGTTGGAAAGACAGTATCACTGGTGTTGGACAGGACTTTAGAAGTGTCCAAGAATTCCGTGATGCCTTGCAGAAATATGCCATTGCGCATCATTTTGCGTATAGGTATATCAAGAATGACACAATTCGTGCGAGAGCCAGATGTGCATGTGAAGATTGTCCATGGAGGATTTTTGCTTCGTGGGTCCCAGCTGATGATTCATTTAGAATTAAAAAGATGGAGGAGCCACATACTTGTGGGGGAAAATCTTGGAAGTCTACTCATCCCTCAAAGAACTGGTTGGTAAACGTCGTAAAGGACAGATTACGAGATAACCTTCATCACAAAACAAAGGAGATTGCTAGGGGCATTCACCGAGACTTTGGCATTCAGGTGAATTACTCTCAAGTATGGCGTGCTGTTGAAGAAGCTAGGGAACAACTGCAAGGTTCATATAAAGAGGCGTACAACCAGTTGCCTAGGCTTTGCGAGAAGATGTTAGAGTCGAATCCTGGCAGCTGTATCAAGCTTGTCACAAGTGAGGACAAAAGATTTCAGCGTCTTTTTTTGTCCTTTCATGCTCTGATACAAGGATTTCAGGCTGGTTGCCGCCCTCTTCTCTTCCTCGATTCCACACCTTTGAAATCAAAATATCATGAGGTTTTATTGACGGCTACTTCTCTAGATGGCGATGATGGTGCTTTCCCTGTTGCACTGTGTATAGTTGATGTTGAGAATGATGATAACTGGAATTGGTTTTTAGAGCAGTTGAAGCTTACAATACCGACTTCCCAGCCTTTGACTTTCGTGTCTGATTGGGAGAAGGAGTTAAAGCAAACAGTTCTAAAGGTATTCGAAAATGCCCACCATGGTTATTCCATGTACCACCTTCTAGACAGCTTCAAGAAAAGTCTGAGGGGTCCTTACCATGGGGAAGGTAGGCCTTCTTTGCCAGTTAATTTTCTATCTGCTGCGCACACACTGCGGCTCGACGGTTTCAAAATGTTCTTAGAACAGATTAGAAAGGTCTCTACGACAGCATATGATTGGGTCATGGAAGTTGAACCAGAGCAGTGGGCAAGTGCATTATTCAAAGGCGAGCGGTATAATCATATTCTTGTAGATGTTGCTGAGTTATACACCATGTGGATCGATGAAGTGCGAGAGCTACCCATAACACAAAAGGTAGAAGCACTTGGATGTAAGATCATGGAGTTAATAAACAACCGTCGAGCGGCTTCGAGTAGTTGGACATCGAGACTGACTCCAACAAAGGAGGAATTGGTGCTTGACGAATCCCTCAGGGCACAGGGCCTTAAAGTCTTGTTCTCATCAGACACCTTGTTTGAGGTTCATGACGACTCTGTCCGTGTCGTCAATATCGAAAAGTGGGATTGTAGCTGTTTGAGATGGAAAGCAACAAGGCTGCCATGTTGCCATGCTATAGCTGTCTTGAATTGCACACGTCGAAGTGTATATGACTACTGTGTGAAATACTTCACTGCTGATAACTTCCGTCGCACGTACTTTGAATCCATAAATCCTGTCTCTGATTATTTATCAATAAATCCTGCTTCTGATGGTTTGAACCATAGCGGGAAAGCCGAGGAGGAGGAGGAGGATGATGAGGAGGAGGCGGCGGAGGTGGAGGAGGAGATTGAGATTGAGAGTAATGTACTTCCTCCTTGCAATTCAAGACCTTACTGCCAAAATAAGAAAGATGAGAATAAAACAGCAAAGAAATCTAGGAAGACTGTTACTTGTACCAAGTGCAAAGGAAGAGGCCATAATAAGGCTACTTGTAAAGAGACATCGTGA 2607 0.4285 MVKGKLILISQSGGEFLTNDDGSMSYTGGEAHAVEINHETSFDDLKLKIAELWNLQTKTMSIKYFLPGNRKTLICLSNDRDLNRMKEFYAASITADVFISGKEGFDQESLNMNTRRNNINVAEAVTPANPSKTKSKTVRKRIASAGTSANRSPNHAVNNKHGAACSRPPGSVAIVTDTSSHGGILSDMDASPADAVKKRRRAASRAVTANGPTIEAASGENNKVMPRKKNKKDHGGAAADNGKHQLDLLFNEDSDNLLVGTDITPGKLAECWKDSITGVGQDFRSVQEFRDALQKYAIAHHFAYRYIKNDTIRARARCACEDCPWRIFASWVPADDSFRIKKMEEPHTCGGKSWKSTHPSKNWLVNVVKDRLRDNLHHKTKEIARGIHRDFGIQVNYSQVWRAVEEAREQLQGSYKEAYNQLPRLCEKMLESNPGSCIKLVTSEDKRFQRLFLSFHALIQGFQAGCRPLLFLDSTPLKSKYHEVLLTATSLDGDDGAFPVALCIVDVENDDNWNWFLEQLKLTIPTSQPLTFVSDWEKELKQTVLKVFENAHHGYSMYHLLDSFKKSLRGPYHGEGRPSLPVNFLSAAHTLRLDGFKMFLEQIRKVSTTAYDWVMEVEPEQWASALFKGERYNHILVDVAELYTMWIDEVRELPITQKVEALGCKIMELINNRRAASSSWTSRLTPTKEELVLDESLRAQGLKVLFSSDTLFEVHDDSVRVVNIEKWDCSCLRWKATRLPCCHAIAVLNCTRRSVYDYCVKYFTADNFRRTYFESINPVSDYLSINPASDGLNHSGKAEEEEEDDEEEAAEVEEEIEIESNVLPPCNSRPYCQNKKDENKTAKKSRKTVTCTKCKGRGHNKATCKETS 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00932 868 MobiDBLite consensus disorder prediction 799 814 - -
Accr12g00932 868 MobiDBLite consensus disorder prediction 790 814 - -
Accr12g00932 868 Pfam SWIM zinc finger 722 750 IPR007527 GO:0008270
Accr12g00932 868 MobiDBLite consensus disorder prediction 145 159 - -
Accr12g00932 868 Coils Coil 795 822 - -
Accr12g00932 868 Pfam PB1 domain 23 91 IPR000270 GO:0005515
Accr12g00932 868 MobiDBLite consensus disorder prediction 145 240 - -
Accr12g00932 868 Pfam MULE transposase domain 470 561 IPR018289 -
Accr12g00932 868 SMART PB1_new 19 102 IPR000270 GO:0005515
Accr12g00932 868 Pfam MuDR family transposase 276 340 IPR004332 -
Accr12g00932 868 PANTHER POLYPROTEIN, PUTATIVE-RELATED 272 797 - -
Accr12g00932 868 SMART 26again6 727 754 IPR006564 GO:0008270
Accr12g00932 868 SUPERFAMILY CAD & PB1 domains 20 95 - -
Accr12g00932 868 MobiDBLite consensus disorder prediction 222 240 - -
Accr12g00932 868 ProSiteProfiles Zinc finger SWIM-type profile. 720 752 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00932 Accr-Chr12 9528351 9531254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00932 2 89 MAP Kinase Kinase Kinase AT1G79570 33.333 1.44e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00932 - - pcin:129321032 1467.21